Aminithiophilus ramosus: KAR29_06135
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Entry
KAR29_06135 CDS
T08824
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aram
Aminithiophilus ramosus
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aram03016
]
KAR29_06135 (thpR)
Enzymes [BR:
aram01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KAR29_06135 (thpR)
Transfer RNA biogenesis [BR:
aram03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KAR29_06135 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QTX33444
UniProt:
A0A9Q7EX83
LinkDB
All DBs
Position
complement(1357270..1357890)
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AA seq
206 aa
AA seq
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MNGVDALEDRRRCFLAVAIDEKIKEEIGRAAAVLPRALRPVAVESLHVTLRFYGEITSRE
RAVIEGYLGESLRRDPLSPFFLRLRGRGLFPSRGAPRVLWIGLSPVADGLIELARRGEGA
AVAAGLPPERRPFSPHLTLARFREGQKSDGQEILSLLPDRFWGEWAVKSLSLMSSTLRPQ
GPLYRPLRVFDLKEVAPGGQESSTHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggagttgacgccttggaggaccgccggagatgcttcctcgccgtcgccatcgac
gagaaaatcaaagaggaaataggaagggccgccgcggtccttccacgcgccctccgtccc
gtcgccgtcgaatcccttcacgtcacgctgcgtttttacggagagatcacctcccgcgaa
agggcggtgatcgagggctatctgggcgaaagcctccgccgtgatcctctctcccccttc
ttccttcgccttcgggggcgggggcttttcccgtcccgaggcgctccccgcgtcctatgg
atcggcctttctcccgtcgcggacggcctgatcgaactggcccgcaggggggagggggcc
gccgtcgccgccggacttcctcccgagcggcgtcccttctcaccccatctcaccctggcc
cggttccgagagggacaaaaaagcgacggacaggagattctctcccttctgcccgaccgt
ttctggggcgagtgggccgtgaaaagcctgagcctgatgagcagtacgttgaggcctcag
gggccgctttaccgtcccctgagggtgttcgacctgaaggaggtggccccaggtggccaa
gaaagttcaactcacgcgtga
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