Aminithiophilus ramosus: KAR29_06235
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Entry
KAR29_06235 CDS
T08824
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
aram
Aminithiophilus ramosus
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aram03019
]
KAR29_06235
Messenger RNA biogenesis [BR:
aram03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KAR29_06235
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GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QTX33464
UniProt:
A0A9Q7AG33
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All DBs
Position
complement(1376243..1377286)
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AA seq
347 aa
AA seq
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MTETVQRCTISEIRNLADGQAFKGSFVVQKISRRKDKNDRPFWDLHVMDRTGTVEGKVWS
DAVWFDFPDGAEPLRIDNEDRIGRDGLDGQTVGLRGKKVTFNGRPQVNFTALFLLDQKSH
PPHDFVQRSPVPEEELQRRFEALRALCAGSVGAFLDFVFSGERGASFRVVPAAVSHHHAY
VHGLLEHTVSVAENAFALARSNRDRGLAVDVALTVAGALIHDLGKIESYVLNPTPEVTVE
GTFLDHIPLGFALFSRLADEFGLEGEERTLLGHIILSHHGQKEYGSPVLPASPEALIVAA
ADELDFRLFCWREAVSDLDEGREISDFHRSTQRRFWKRSPFAQEVTS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgacggaaaccgttcagcgctgcacgatctccgaaatccgcaatctcgccgacggacag
gccttcaaaggttccttcgtcgtgcagaagatctctcgacgcaaagataaaaacgatcgc
cccttctgggatctccatgtcatggaccggacagggacggtcgaggggaaggtctggtcc
gacgccgtctggttcgacttccccgacggagccgagcccctccggatcgacaacgaggat
cggatcggccgggacggcctcgacggtcagaccgtcggcctccggggcaagaaggtcacc
ttcaacggccgaccgcaggtcaacttcacggccctcttcctcctggaccagaagagccat
ccgcctcacgacttcgtccagcgttcccccgttcccgaggaggagctccaacgtcgtttc
gaggccctgcgcgccctctgcgcgggttccgtcggcgcctttctcgacttcgtcttctcc
ggcgagagaggagcctctttccgcgtggtgccggccgccgtcagccatcatcacgcctac
gtccacggcctgctggagcataccgtatccgtggccgagaacgccttcgccctggcccgt
tccaacagggaccgggggctcgccgtcgacgtggccctgaccgtggccggtgccctgatc
cacgacctgggcaagatcgagtcctacgtcctcaaccccactccggaggtcaccgtcgag
gggacctttctcgaccatatcccgctgggattcgccctcttttcccgtctggccgacgaa
ttcggcctcgaaggggaggagcggacgcttttgggacacatcatcctgagccaccacggt
cagaaggagtatgggtcgcccgtccttcccgcctcgccggaggccctcatcgtcgccgcc
gccgacgagttggactttcgcctcttctgctggagggaggccgtttccgacctcgacgag
ggaagggaaatcagcgatttccaccgctccacccaacgccgcttctggaagcggagcccc
ttcgctcaggaggtgacatcgtga
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