Aminithiophilus ramosus: KAR29_06590
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Entry
KAR29_06590 CDS
T08824
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aram
Aminithiophilus ramosus
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aram03009
]
KAR29_06590 (rlmD)
Enzymes [BR:
aram01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KAR29_06590 (rlmD)
Ribosome biogenesis [BR:
aram03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KAR29_06590 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
RrnaAD
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QTX33517
UniProt:
A0A9Q7AQE3
LinkDB
All DBs
Position
1455063..1456436
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AA seq
457 aa
AA seq
DB search
MPLQGETRLLRARGVNSEGDGLCDCDDGLVVFVPMMLPGEEALVRLVKVKRSYGIGKVLE
SKAVSPERVTPFCPWFGKCGGCRLQHGSYSLQLEIKEGLLLDAMMRLGGFLRENIPLRPC
VPSPRQRHYRNKASFPIQSFRGVVTPGFFQRDSHHLIPVDRCPLIDPSLEELMKVFRETL
PTLSLRAYDERSQRGSLRHVLLRKGSHSGQGAVLLVLKERPSSALFDELRVFARKTRARF
PLFSSWAINIHPDPGNVIIGSRTLPLSGAPYIEERLGKYVFRMDLTAFFQVNSSQAENLY
ESVKASLGQEEKGDILELYSGVGSLTAYLASTGRRVTAVESWEPSSRSLEHNMKSNAVKN
VSVFRGRAEDYCSTGVLPPFRTVVLDPPRSGSTPEVIAAISRLSPLEILYISCNPATLAR
DLRSFVDTGYRLISLTPFDLFPQTAHVETLAILKRTR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccccttcagggagaaacgcggctgctccgtgcccgtggcgtcaacagcgaaggcgac
gggctctgtgattgcgacgatggcctggtcgtctttgtccccatgatgttgccgggagag
gaagctctcgtgcgccttgtcaaggtcaagcgctcctatggaatcggcaaggtgctggaa
tcgaaggccgtcagtccagagcgggtcacgcccttctgtccctggtttggcaaatgcgga
ggctgtcgcctccagcacggaagctattcccttcagcttgagatcaaagagggtttgctt
ctggatgccatgatgcgtctgggcgggttcctacgggaaaacatccccctccgcccctgt
gtcccctctccccggcagagacactacagaaacaaggcctctttcccgatccaatccttc
cgaggtgtcgtcacccccggttttttccagagagacagtcatcacctgattcccgtagac
cgttgtcccctgatagacccctcgctggaagagctgatgaaggtctttcgtgaaacgctg
ccgactctttcccttcgtgcttacgatgaacgcagccaaagggggagtctccgtcacgtc
cttcttcgcaaaggcagtcattccggccagggagcggtcctgctcgtccttaaagagcgg
ccttcgtcggcccttttcgacgaactacgcgtctttgcgaggaaaacgcgggcccgcttc
ccccttttttcctcctgggcgatcaacatccatcccgatcctggcaacgtcatcattggt
tccagaacgttgcctctctccggagctccctacatagaggaacgattggggaaatacgtc
tttcgcatggacctgacggcctttttccaggtcaattcctctcaggccgaaaatctttat
gaaagcgtgaaggcctccctgggacaggaggaaaaaggcgatatcctagagctctacagc
ggcgtcggcagcctcacggcctatctggcctcgactggacgccgcgtaactgccgtcgaa
tcatgggagccatcgtcgcgcagtctggaacataacatgaaaagcaatgccgtgaaaaac
gtctccgtcttcagaggcagggctgaggactactgttcgacaggtgtacttcctcccttc
cgaacggtcgttctcgatcctccccggagcggcagtactcccgaagtgatcgctgccatc
agtcgcctttccccgctggagattctctatatctcttgcaatccggcgactcttgcccga
gacctccgaagcttcgtcgataccggctatcggctgatctctctgacccccttcgatctt
tttcctcagacggctcatgtcgaaaccctcgcaatcctgaaacggacccggtga
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