Aminithiophilus ramosus: KAR29_07335
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Entry
KAR29_07335 CDS
T08824
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
aram
Aminithiophilus ramosus
Pathway
aram03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KAR29_07335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aram03400
]
KAR29_07335
DNA repair and recombination proteins [BR:
aram03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KAR29_07335
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
HHH_2
HHH
GIY-YIG
UVR
DUF7508
5_3_exonuc
HHH_8
Acetyltransf_6
GIY_YIG_2
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
QTX31217
UniProt:
A0A9Q7ALG5
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Position
complement(1602384..1603838)
Genome browser
AA seq
484 aa
AA seq
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MTHPLQEKVRKLPLRPGVYLFHDGEGTVLYVGKAKSLRKRVASYFRHEGFASPRLRKLVE
SARDLSYIRTESEAEALIVESRLIKKYQPFFNVELKMGERYPFLKITDEPFPRLEITRHR
SDDGGRYVGPFTRVGDLRRLLRLIERHFPLRTCKTDLSGPRQERPCVRHALGRCGGACAG
LTSEAEYGERVADVLLLLQGNAADLVERLRLRMDRAASGLAFEEAARLRDTIRSLWRLSR
QRLSSTLSHDLDRETWTLLLRLQELLGLPTIPWRIDGFDISHFSGKEMYGVAVVFEQGLP
NPSLYRRFAVKSVEGVDDFRALEEVVGRRYRRCLEGEEPLPQLVLIDGGPLQLEFAAGAL
AALGLEELPIVSLAKREEQLFLPGRKEPLELPLSDPALQLLQRVRDESHRFAVASHRRGR
DSRLRRSVLEDVPGVGKKRAALLLIHFGSVQKIASLEPDELTLLTGIGPETARRIVETLR
EEKV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcacccgctgcaagagaaagtgagaaaactgccccttcgccccggcgtctacctt
tttcacgacggagagggcacggttctctatgtgggcaaggccaaatcgttgcgcaagcgg
gtcgcctcttatttccgtcacgaggggttcgcctcgcctcgcctacgcaagctcgtcgaa
tcggcccgagatctctcctatatccgtaccgagagcgaggcggaggcgcttatcgtcgag
tcgagactgatcaagaagtatcagccttttttcaacgtcgaactcaaaatgggcgaacgg
tatcccttcctcaagatcaccgacgagccgtttccccgcctcgaaatcacccgccacaga
agcgacgatggagggcgctacgtaggtccctttacgcgagtcggcgatttgcgccgcctt
ctgcgactgatcgaacgtcattttcccctgagaacctgcaagaccgatctctccggacct
cgtcaggaacgtccctgcgtccggcacgccctgggccgctgcggcggagcctgcgcgggc
ctgacgagtgaggccgagtacggcgaacgcgtggccgatgtcctccttctccttcagggc
aacgccgccgatctcgtcgagcgccttcggctccgcatggatcgcgccgcctcgggactg
gccttcgaggaggcggcacgactgagagatacgatccgctccctttggcgtctgtcccgt
cagcggctttcgtcgacgctgagtcacgatctggaccgggagacgtggacccttctcctc
cgccttcaggaactgctgggtctgccgacgatcccctggcgcatcgacggtttcgacatc
tcccacttctccggcaaagaaatgtacggcgtcgccgtcgttttcgaacagggattgccc
aatccctccctctatcgccgttttgccgtaaaatcggtggaaggcgtcgatgatttccga
gccctcgaggaggtcgtcggccgtcgctatcgccgatgcctcgagggggaggaacctctc
ccccagcttgtcctcatcgacggaggtcccctgcagctcgagttcgccgcgggagctctg
gctgctttggggctggaggaattgcctatcgtctctttggccaaaagggaagaacagctc
ttcctgccggggcggaaagagcctcttgagctgcctctcagcgatcctgcccttcagctt
ttgcagagagtccgcgatgagtctcatcgcttcgccgtcgccagccaccgtcgaggtcgt
gacagtcggctccgccgctccgttctggaggatgtaccgggggtggggaaaaaacgggcg
gccctgctcctgatccatttcgggagcgttcagaagatcgcttcgctggagcctgacgaa
ttgacgctcctgacgggcatcggcccggagacggcccgcagaattgttgagacattgagg
gaggaaaaggtgtga
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