Aminithiophilus ramosus: KAR29_07805
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Entry
KAR29_07805 CDS
T08824
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aram
Aminithiophilus ramosus
Pathway
aram03030
DNA replication
aram03430
Mismatch repair
aram03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KAR29_07805 (dnaE)
03430 Mismatch repair
KAR29_07805 (dnaE)
03440 Homologous recombination
KAR29_07805 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aram03032
]
KAR29_07805 (dnaE)
03400 DNA repair and recombination proteins [BR:
aram03400
]
KAR29_07805 (dnaE)
Enzymes [BR:
aram01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KAR29_07805 (dnaE)
DNA replication proteins [BR:
aram03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KAR29_07805 (dnaE)
DNA repair and recombination proteins [BR:
aram03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KAR29_07805 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QTX31296
UniProt:
A0A9Q7AN93
LinkDB
All DBs
Position
complement(1703935..1707345)
Genome browser
AA seq
1136 aa
AA seq
DB search
MNHPFVHLHVHSEYSLLDGAIHCADLAAQAAAWEMPAVAVTDHGAMFGAVEHYEACRKVG
VNPVIGCEIYVDPEGHRSRDKRGRNYHLCLWAADQEGYQNLIKLVSVANTDGFYYKPRID
HDLLASHSKGLIVGSACLAGEIPSLILEGDMEGATERALLYRDLVGQGNFYLEVMHNAIA
EQALANRGLVEISRKTGIPLIATNDAHYLRKEDASWHDVLLCIQTNATVDEQNRFRFGSD
DFYLRSPEEMWRLFGTELPEALTNTVEIGQRCRVELTFGQYLFPDFEIPQGETLESHLDR
QAWEGLRSRFRDREVTEEYASRLEYELSVIKQMGFAGYFLIVADFINAAKNRDIPVGPGR
GSAAGSLVAYAMRITEIDPLPHHLLFERFLNPERISMPDVDTDISDKGRDEVIRYVVEKY
GKEKVSQIITFDRMKTKAAIRDVGRALAMPYGDVDRVAKLVTEGVKSVGEALEQSEDLRK
LKGDDPAVARLLDIASRAEGIVRHCSQHAAGVVIAPGPLEEILPIKRLGDETIVTQYSME
PVEKLGLVKMDFLGLKNLSLIEGCLRNIEGNGKGKIDLLDVPLDDGKTFELLQKGDTMGV
FQLESAGMRQLLKRLRPDSFADLVAVLALYRPGPLGSGMVDQYIERKHGRAPVQYLHPDL
SDVLGETYGVVLYQEQIMQIAAKLAGYSLGEADLLRRAMGKKKIDVMAQQREKFVGGCES
RGVAKAKAEEIFDIVQVFAGYGFNKSHSAAYALISYQTAYLKARFPVEFLAAFLSNQIGS
KMDVLARYVKEVRNTGIEVLPPDVNESKADFTVVGEVIRFGLSAVSKVGGGAVEAILKGR
EERGPFRSLWDFLSKVDLRTVNRAVVENLIKAGAFSALPGNRRQMIEVLPGFIEMAQRRL
ADQNQGSLFSSVVPEAGEEPPFPSLDDFPPQEKLEMEFEAVGLYISGHPLDRYAARLNRL
VNCPIAELPLWQSEDVPVVVGGLVSSVKERYTKRGDAMGVLEIEDTEGKIEVVSFPRSWP
QVKGLVALGDVVIAKGRLQDRGSLSLIADAVLPLEVAEAETPPWLRIRFAPAQVEDRHIK
EFFRELKGFPGRSPVLLEIVAPGGTALVGLRDVRVNVEAPLQERFDLLCQGAVEVL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcccttcgttcatctgcatgtccacagcgaatacagcctcctcgacggagcc
atccactgtgccgacctggccgctcaggccgcggcctgggagatgcccgccgtggccgtc
accgaccacggcgccatgttcggcgccgtcgagcattacgaggcctgccggaaggtaggc
gtcaatcccgtcatcggctgtgagatctacgtcgatcccgagggacacagaagccgcgac
aaaagggggcggaactaccacctctgcctgtgggccgccgatcaggaggggtaccagaac
ctgatcaaactcgtctccgtggccaacacggatgggttttactacaagccccgcatcgat
cacgatctgttggcgagccattcgaagggactcatcgtcgggtcggcctgcctggccggt
gagattccctcgctcattctggaaggcgacatggagggggccacggagcgggctctcctt
taccgggacctcgtcggccaggggaatttctacctcgaggtgatgcacaacgccatcgcc
gaacaggccctggccaacagggggcttgtggagatctcgcgcaagaccggtatccccctc
atcgccaccaacgatgcccactacctgaggaaagaggacgcctcctggcacgatgtcctc
ctctgcattcagaccaacgccaccgtcgacgagcagaatcgcttccgattcggaagcgac
gacttctacctccgctcgcccgaggagatgtggcgtcttttcgggaccgaactccccgag
gcgctgacgaacaccgtcgagatcggccagcggtgtcgtgtcgaactgactttcggtcag
tatctctttcccgacttcgaaattccccagggggagacgctcgagtcccacctcgaccgc
caggcatgggaaggtctccggtcccgcttccgcgatcgggaggtcacggaggaatatgcc
tcccgcctcgagtacgagctttccgtcatcaaacagatgggtttcgccggctacttcctc
atcgtcgccgacttcatcaacgccgcgaaaaaccgcgatattcccgtcggccccggtcga
ggttcggcggcggggtccctcgtcgcctacgccatgaggatcaccgagatcgatccgctt
cctcatcatcttctcttcgagcgttttctcaaccccgagaggatctccatgcccgacgtg
gacacggatatttccgacaaggggcgcgacgaggttatccgctacgtcgtcgaaaagtac
ggcaaggagaaggtctctcagatcatcaccttcgaccggatgaagaccaaggccgccatc
cgcgacgtggggcgggccctggccatgccgtacggcgacgtggaccgggtggccaaactc
gtcacggagggggtcaagtccgtcggcgaagcgctggaacagtccgaggatctgagaaaa
ctcaaaggggacgatcccgccgtcgccaggctcctcgacatcgcctcccgcgccgaaggg
atcgtccgccactgttctcagcacgccgccggagtcgtcatcgccccgggtcctctggag
gagatccttcccatcaagcggctgggcgacgagacgatcgtcacccagtattcgatggag
cccgtcgagaagctgggcctcgtcaaaatggacttcctcggattgaagaatctctctctc
atcgagggctgtctgcgcaacatcgagggcaacggcaagggaaagatcgatctcctcgac
gtgcctctcgacgacggaaaaaccttcgagctcctccagaaaggcgatacgatgggcgtc
ttccagctcgaatcggcggggatgcgtcagcttctcaaacgccttcggcccgacagcttc
gccgacctcgtcgccgtgttggctctctaccgccccggtcctctggggagcggcatggtc
gatcagtacatcgagcgcaaacacggtcgggctcccgtccagtatcttcatcccgacctc
tccgacgtcctgggtgagacttacggcgtcgttctctatcaggaacagatcatgcagatc
gccgccaagctggccggctacagcctgggcgaggccgatctgcttcggcgggccatgggc
aagaaaaagatcgacgtcatggcccagcagagggagaaattcgtcggcggctgcgagtcc
cgcggcgtggccaaggccaaggccgaggagatcttcgatatcgtccaggtctttgccggc
tacggcttcaacaagtctcacagcgccgcctacgctctcatcagctaccagacggcctat
ctcaaggcccgtttccccgtcgaattcctggcggccttcctctccaaccagatcggctcc
aagatggatgtcctggcccgttacgtcaaagaggttcgcaacacgggcatcgaagtcctt
cctcccgacgtcaacgaatcgaaggccgacttcaccgtcgtgggcgaggtgatccgtttc
ggcctctcggccgtctccaaagtgggaggaggggctgtcgaggccattctgaagggccgg
gaggaacgggggcctttccgctccctctgggattttctctccaaagtcgacctgaggacc
gtcaatcgggccgtcgtcgaaaacctcatcaaggccggcgccttttcggctcttcccggc
aatcgccgtcagatgattgaggtccttccggggttcatcgaaatggctcagcggcggttg
gccgaccagaatcaggggtccctcttttcctccgtggtccccgaggctggcgaggagccc
ccctttccgtctctcgacgactttcccccccaggagaagctcgagatggagttcgaggcc
gtaggtctctacatctccggtcaccctctcgaccgttacgcggcgagattgaaccgcctc
gtcaactgtcccatcgcggaactgcctctctggcagtccgaggatgttcccgtcgttgtc
ggaggattagtctcttcggtcaaggaaagatatactaaaagaggggatgccatgggagtc
ctcgaaatcgaggatacggagggcaagatcgaagtcgtctccttcccccgttcctggccc
caggtcaaggggctcgtcgccctcggcgatgtcgtcatcgccaaggggcgccttcaggat
cgcggctcgcttagcctcatcgccgatgccgttctgcccctcgaggtcgccgaggcggag
acgccgccctggctgcggatccgattcgccccggcccaggtcgaggaccgccacatcaag
gaatttttccgcgagctcaagggttttccgggacggtctcccgtgttgctcgaaatcgtc
gctcccggcggcacggccctcgtggggctccgtgacgtccgtgtcaacgtcgaggctcct
ctgcaggaacggttcgatcttctctgccagggcgctgtcgaggtcctatag
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