Aminithiophilus ramosus: KAR29_08985
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Entry
KAR29_08985 CDS
T08824
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aram
Aminithiophilus ramosus
Pathway
aram03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KAR29_08985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aram03021
]
KAR29_08985
03400 DNA repair and recombination proteins [BR:
aram03400
]
KAR29_08985
Enzymes [BR:
aram01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KAR29_08985
Transcription machinery [BR:
aram03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KAR29_08985
DNA repair and recombination proteins [BR:
aram03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KAR29_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
QTX31500
UniProt:
A0A9Q7A5C7
LinkDB
All DBs
Position
complement(1951352..1952344)
Genome browser
AA seq
330 aa
AA seq
DB search
MEPIRPEIRVEESTPRFGRIVVEPLERGFGVTLGNALRRVLLSSVRGAAITAVRVEGVLH
EFSTIPGVREDVIELVLNLKHVPVRCYAEEESRILRLEAQGPCRVTAGMIEPDSEIDFVD
PDAYICELEEGARLAMDLYVEQGVGYLPNDRPRAAYLPVDSLPIDALFSPVERVKYEVQA
ARVGQRTDYDSLVLEVWTNGVISPEEAVAESSQILKGYFSQIAGDLGRSVVVESPLAPVG
AEGDESASPTGDEDGFLARPVRDLELSIRSENCLLRGGILSIGDLVGRSKEDLLKIRNLG
KISLREIEEKLEQAGLSLITAETEKETKEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatccgtcctgaaatacgggtcgaggaaagcaccccccgcttcggcaggatc
gtcgtcgagccccttgaaaggggcttcggcgtcaccttgggcaatgccctccggagggtc
ctgctgtcatcggtgcggggcgcggccatcacggccgtccgcgtcgagggagtgctccac
gaattcagcaccattcccggagtgcgggaagatgtcatcgagctcgtcctgaacctcaag
catgtccccgttcgctgttacgccgaagaggaatcgcggatcctgcgcctcgaggcgcag
ggaccctgtcgggtgacggcgggaatgatcgagcccgacagcgagatcgacttcgtcgac
cccgatgcctacatctgcgaactcgaagagggcgcgaggctggccatggacctctacgtc
gaacagggcgtgggatacctgcccaacgacagacctcgcgcggcctacctgcccgtcgac
tccctccccatcgatgcccttttctcgcccgtggagcgcgtcaagtacgaagtgcaggcg
gcccgggtcggccagaggacggactacgacagcctcgtcctcgaggtctggaccaacggc
gtcatctcccccgaggaggccgtcgccgaatcgtcgcagatcctcaagggctacttctcc
cagatcgccggcgacctggggcgttccgtcgtcgtcgaatcgcctctcgctcccgtcggt
gccgagggcgacgagagcgcttccccgacgggagacgaggacggattcctcgcccggccc
gtccgcgatctcgaactctccatccggagcgagaactgcctcctccggggcggcatcctt
tccatcggcgacctcgtcggccggagcaaggaagatctgctcaagatccgcaacctcggc
aaaatctccctcagggagatcgaagagaaactggaacaggcgggcctgagcctcatcacc
gccgaaacggaaaaggaaacgaaggaggaataa
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integrated database retrieval system
