Aminithiophilus ramosus: KAR29_09230
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Entry
KAR29_09230 CDS
T08824
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
aram
Aminithiophilus ramosus
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aram03019
]
KAR29_09230
03009 Ribosome biogenesis [BR:
aram03009
]
KAR29_09230
Messenger RNA biogenesis [BR:
aram03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KAR29_09230
Ribosome biogenesis [BR:
aram03009
]
Prokaryotic type
rRNA processing factors
KAR29_09230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF7368
RD3
DUF8389
Motif
Other DBs
NCBI-ProteinID:
QTX31546
UniProt:
A0A9Q7A5K3
LinkDB
All DBs
Position
complement(1996608..1998113)
Genome browser
AA seq
501 aa
AA seq
DB search
MTCDRKIIANTLDNEEVRVAIVERGRLYDLFIERMWERQRAGEIYKARVDSVLPGMNSAF
LNLGDGRNAFLYLDDAKGKKLKPNDEVIVQVMKTARKGKGARVTTRLSLPGRYLVLVPAG
KESGVSKRIESEEERHRLRHLAREIRPEGCGVIIRTAAEGIDGEDLAQDVGELLELWREV
EHNASVQPSPCLLYRDLGLLGRVLRDELTEDVSEIVVDSEEELERIRPFVERFCRGRVPE
IDLYRGHVPLFDFYGIEKELETILDRKLWLESGAYLIIDQTEALTVIDVNTGKFVGRTNL
RDTVLRTNLEAADEIARQLRLRAIGGIVVIDFIDMDHEEDRQLLIDRLNEAFHGDRYKAR
VFSVTQLGLVEITRKRARLDLRAALTRGCPFCAGTGWVLKEETVAVSVKRFLRKVSLSSK
SEAILMELYPDVARHIASTYLPAWEEELNRRLFLREIDDFPWSKYRLDSQGSLAQIERRV
AALKDKEATVVVHRTAEPEGL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgacctgtgatcgcaagatcatcgccaataccttggacaacgaggaagtgcgcgtcgcc
atcgtcgagagaggccgtctctacgatctcttcatcgagcggatgtgggagaggcagagg
gcgggagagatctacaaggcccgcgtcgacagcgtcctccccggcatgaattcggccttt
ctcaacctcggcgacggacgcaacgccttcctctacctcgacgacgccaaaggaaagaag
ctcaagcccaacgacgaggtcatcgtccaggtcatgaagacggcccgaaaggggaaggga
gcccgcgtcacgacgcgcctctccctgcccggccgctacctcgtcctcgtgccggcagga
aaggaatcgggcgtctccaagcgcatcgaaagcgaagaggagcgtcatcgtctccgtcat
ctggcccgggagatccgtcccgaagggtgcggcgtcatcatccgcaccgccgccgagggc
atcgacggcgaagatctggcccaggacgtgggggagttgctggagctctggcgcgaagtg
gaacacaacgcctccgtccagccctctccctgcctcctctaccgggatctgggccttctc
ggacgggtcctgcgcgacgagctgacggaagacgtctcggagatcgtcgtcgacagcgaa
gaggaactggagaggatccgtcccttcgtggaacgtttctgccgcggccgcgtccccgag
atcgacctttaccgcggccatgtcccccttttcgatttctacggcatcgagaaggagctc
gagacgattctcgaccgcaaactctggctcgaatcgggcgcctacctcatcatcgatcag
acggaggccctcaccgtcatcgacgtcaatacgggcaagttcgtcggcaggaccaacctg
cgcgacacggtcctcaggaccaatctggaggcggccgacgagatcgcccgtcagctccgt
ctccgggccatcggcggcatcgtcgtcatcgacttcatcgatatggatcacgaagaggac
cggcagctcctcatcgaccgcctcaacgaggccttccacggcgaccgctacaaggcccgc
gtcttcagcgtcacccagctgggactcgtcgagatcacccgcaagcgggcccgcctcgat
cttcgtgccgccctcaccaggggctgtcccttctgcgccggcacgggatgggttctcaag
gaggagacggtggccgtctccgtcaaacgtttcctgcgcaaggtctccctgtcgagcaag
tcggaggccatcctcatggagctctatcccgacgtggcacgccacatcgcctcgacctac
cttcctgcctgggaggaggagctgaaccgccggctcttcctgcgggaaatcgacgatttc
ccctggagcaagtaccgcctcgacagccagggctcgttggcccagatcgagcgccgggtg
gcggcgctgaaggacaaggaggccaccgtcgttgtacatcgcacagctgagcctgaagga
ctttaa
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