Aminithiophilus ramosus: KAR29_09775
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Entry
KAR29_09775 CDS
T08824
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
aram
Aminithiophilus ramosus
Pathway
aram02020
Two-component system
aram02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KAR29_09775
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KAR29_09775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aram03021
]
KAR29_09775
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aram02035
]
KAR29_09775
Transcription machinery [BR:
aram03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KAR29_09775
Bacterial motility proteins [BR:
aram02035
]
Flagellar system
Flagellar assembly proteins
Stator
KAR29_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_r3
MarR_2
Sigma70_ECF
PhyR_sigma-like
MarR
KORA
HTH_Crp_2
UPF0122
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QTX31641
UniProt:
A0A9Q7AP56
LinkDB
All DBs
Position
complement(2105517..2106260)
Genome browser
AA seq
247 aa
AA seq
DB search
MSRESDRELWSDFASDPSAENREKLVVRYLPLVRYVANRMALVPPPGLDYEDLLSFGVFG
LLDAMDRFDPRKGFVFQTFAVPRIRGAILDELRRYDWISRSGREKLSRLEEASERLYQSK
GAIDEKELMATLEMDEKSYRELLEISGRTYLVSLDDVFLLEEGDVLRGGAVADEGPDAQS
LLERDEERSRVASALVDLPERERLLLSLYYYEGLTLKEIGEVLGVTESRVSQLHGKAIAA
LRGRLRP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgagagagcgaccgcgagctgtggagtgacttcgcctccgatccgtcggcggaa
aacagggaaaaactggtggtccgctatctccccctggtccgctacgtggcgaaccgcatg
gccctcgtgcctcctccgggccttgattacgaggaccttctcagcttcggcgtcttcggc
ctcctcgacgccatggaccgtttcgatccccgcaaggggttcgtcttccagaccttcgcc
gttccccgcatccggggagccatcctcgacgagctgcggcgctacgactggatctcccgt
tcggggagagagaagctctcccgtcttgaggaggcctcggagcggctctatcagtcgaaa
ggggccatcgacgagaaggagctcatggcgactctcgagatggacgaaaagagttatagg
gagctgctggagatatcggggaggacctacctcgtctccctcgacgatgtctttctcctg
gaggagggcgatgtcctccgggggggcgccgtcgccgacgaggggcccgacgcccagagc
cttctggagcgcgacgaggagcggagccgtgtggcgtcggccctcgtcgacctgcccgaa
agggagcgccttctcctctctctctactattacgaggggctgaccctcaaggagatcgga
gaggtcctgggcgtcaccgagtcgcgggtttcccagcttcacggcaaggccatcgccgcc
cttcgcggacggctacgtccgtaa
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