Aminithiophilus ramosus: KAR29_13395
Help
Entry
KAR29_13395 CDS
T08824
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aram
Aminithiophilus ramosus
Pathway
aram04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KAR29_13395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aram03019
]
KAR29_13395
03009 Ribosome biogenesis [BR:
aram03009
]
KAR29_13395
04131 Membrane trafficking [BR:
aram04131
]
KAR29_13395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aram04147
]
KAR29_13395
Messenger RNA biogenesis [BR:
aram03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KAR29_13395
Ribosome biogenesis [BR:
aram03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KAR29_13395
Membrane trafficking [BR:
aram04131
]
SNARE
SNARE associated proteins
Others
KAR29_13395
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KAR29_13395
Exosome [BR:
aram04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KAR29_13395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_14
TIP49
AAA_22
AAA_5
AAA_lid_PRS2_C
AAA_28
AAA_33
nSTAND3
DUF815
RNA_helicase
Zeta_toxin
nSTAND_NTPase5
AAA_17
AAA_3
Mg_chelatase
AAA_7
TsaE
NPHP3_N
AAA_18
IstB_IS21
NB-ARC
AAA_25
ATPase_2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QTX32277
UniProt:
A0A9Q7EZK1
LinkDB
All DBs
Position
complement(2972791..2974917)
Genome browser
AA seq
708 aa
AA seq
DB search
MGKINNSVFIVAESNLKDVGRGIVRIDPVDMEIMGVSVGDVVQIEGERQTIAKIMPTFPQ
DRGKRIIQMDWTLRNNAKTSLNNNVNVIKIDFKLAEKIVIAPLSNVRIPLGDKDISYIGS
ILTGLAVIEGDFIRVNFMGNRNQDFLVNNTTPGGPVLISQKTRILLDKIQQNSTKRSKIS
YEDIGGLSRELKKIREMIELPLKCPRLFDRLGIDPPKGVLLYGPPGCGKTLIARAVASET
AAYFVHVTGPEIMGKFYGESEARLRGFFEEARKNAPSILFIDEIDAIAPKREEMGGEKQV
ERRVVAQLLALMDGLESRGDVIVIGATNIPNALDPALRRPGRFDRELEIAIPDQRDRLEI
LSIHVRGMPLASDVDLERLSRVTHGFVGADMEALCREAAMSVLRRVVPDYTCRIEEVADI
DILQMEVMMDDFLGALKEVEPSAIREVFVEVPDVSWEDVGGLREIKRQLSEAVAWPLKHG
ELLASVGLRPPKGILLSGSPGLGKTLVVKAMANESEINFISVKGSELLSKYVGESEKGVR
EVFRKARQASPCILFFDEFDSLVPLRHSFGDSQVIDRVISQFLSEMDGIEELKDVLVLAA
SNRQDLIDPAIIRPGRFDLILNFNLPDKDDRIEILKIHSKKMPLDGDVSLEEISMRTEDF
SGAELKQLCQEAARLALREYMASNGENKIVILKNHFDLAINSVMERKR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcaataattcagtatttattgtagctgaatctaatttaaaagatgtcggg
agaggaattgttcgcatagaccctgtagatatggaaataatgggtgtaagtgtaggcgat
gtggttcagattgaaggagaaaggcaaactatagctaaaataatgcctacttttccgcaa
gatcgaggaaaaagaataattcaaatggattggactctaagaaacaatgcaaaaacgtca
ttgaacaataacgtcaatgtaataaagatagattttaaattagcggaaaagattgtcata
gctcctttgtcaaacgttcgtattccacttggagataaggatatttcctatataggatcc
attttgacaggtcttgccgttatagagggtgatttcataagagttaactttatgggaaac
aggaatcaggattttttggtcaataataccactcctggcggacctgtccttatttcgcaa
aaaactcgtattttattagataaaattcaacaaaattcaactaaaagatccaaaatatcc
tatgaagatataggtggattgtcaagagagcttaaaaaaatacgagaaatgatcgaactt
cctctgaaatgtccccgccttttcgatcgactgggtatagatcccccgaagggggtattg
ctctatggtcctccgggctgtggaaaaaccctgatcgccagggctgtcgccagtgaaacg
gcagcgtatttcgtccatgtgacggggcctgaaattatgggcaagttttatggtgagagc
gaggccaggttgaggggcttttttgaagaggccagaaagaatgccccgtcgattcttttt
atcgacgagatcgatgccattgcccccaagcgggaggaaatgggcggggagaaacaggtg
gagaggcgggtggtcgcgcagctgttggctctgatggatggcctagagtcgcgcggtgac
gtcattgtcatcggtgcgacgaatatacccaacgccttggatccggcgcttcgtcgcccg
ggacggtttgatcgggagctggagatcgccataccggaccagagggacaggttggagata
ttgagcatccacgttcgaggcatgccgctcgcctccgatgtcgatttggagaggttgtcg
cgagtgactcacggttttgtcggtgccgatatggaggccctgtgtcgggaggcagccatg
agcgtcctgcggagggtcgttcccgattacacctgtcggatcgaagaggtcgccgacatc
gatattttgcaaatggaagtgatgatggacgacttccttggtgccctcaaagaagtggaa
ccatcggccattcgggaggttttcgtggaggtgcccgacgtgagctgggaagatgtcggt
ggccttcgcgagatcaagaggcagctttcggaggcggtggcttggccgcttaagcatggc
gagctgcttgcgagcgtggggcttcggccgccgaagggcatcttgctctcggggtctccc
ggattgggtaaaacgttagtggtgaaggccatggccaacgaaagtgaaattaatttcata
tccgtaaaaggctcggagcttttgtctaaatatgttggagagtcggaaaaaggagttcga
gaggtatttcgtaaagcgagacaggcaagcccttgtattttatttttcgatgaatttgat
tcattggtccctctaagacattcttttggagattctcaagttattgatcgagtaatcagc
caattcctctccgaaatggatggaattgaagagctcaaagatgttttagttttagctgca
agcaataggcaagatttgatagatccagcgatcattcgcccgggcagatttgatctaatt
ttaaatttcaatcttccagataaagatgatcggatagaaatccttaagatacatagcaaa
aaaatgcctttggatggcgatgtctcgcttgaagaaatttctatgcgtacagaagatttt
tctggagcagagctcaagcagttatgtcaagaagcagctcgcttggcgttaagagaatat
atggcttcaaacggtgaaaataaaattgttatacttaaaaatcattttgatttagccatt
aatagtgtaatggaacgcaagaggtga
DBGET
integrated database retrieval system
