Arachidicoccus sp. BS20: A9P82_00595
Help
Entry
A9P82_00595 CDS
T04406
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
arb
Arachidicoccus sp. BS20
Pathway
arb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9P82_00595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arb03019
]
A9P82_00595
03009 Ribosome biogenesis [BR:
arb03009
]
A9P82_00595
Enzymes [BR:
arb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9P82_00595
Messenger RNA biogenesis [BR:
arb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9P82_00595
Ribosome biogenesis [BR:
arb03009
]
Prokaryotic type
rRNA helicases
A9P82_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
SNF2-rel_dom
CMS1
YwpF
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ANI87945
UniProt:
A0A191TGV9
LinkDB
All DBs
Position
128863..130536
Genome browser
AA seq
557 aa
AA seq
DB search
MITFEELGLDERLVQAVTEMGYVNPTPIQEKAIPVLINGTKDLIGLAQTGTGKTAAFGLP
LLHLLDANDKYPQALVVCPTRELCLQIVNEIISFKKHIKGLQVVAVYGGASISLQIKDIR
RGAQVVVATPGRLIDLIERKAINLEQIKYVVLDEADEMLNMGFQDDIEFILQNTPNRDST
WLFSATMPNEIRKVSKRYMKEPVEITVGKVNTANKNIDHQYYVTSAIHRYETLKRLIDFN
PGIYGIIFTRTKAEAQEIAEKLTREGYDIDALHGDLSQPQRDKVMNQFRDRSLQLLIATD
VAARGIDVKDITHVINYELPDDVEVYTHRTGRTGRAGNTGVAISIIHQREAYKLRQIEKI
IQTQINKVEIPSGKDVCRKQFFYFMDKLLKADISHGDYETYVPMLEEKFADISKEEVLKR
VAALEFDRFLKYYENAGDLNARIQDRNERRSDDRGRGRNSRDGGRRDSRDFQGDTTRLFI
NIGTKDGFYKASFLQFILDMSDLRKDVLGRIDMKEMNSWVEIDKRAANQMIRALDGKNFK
GRKIRMNDADSGGGRRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgataacatttgaagagttaggattagacgagcgtttggtgcaggcagttacggaaatg
gggtatgtaaatcccacgccgatacaggaaaaagcgattcccgttctaatcaacggaaca
aaagacctcatcggtcttgcgcagacagggaccggaaaaacggcggcattcggtctgccg
ttgctgcatttgctcgatgcaaacgataagtatccgcaggcgttggtcgtttgtcctacg
agagaactatgtttgcaaattgtaaacgaaataattagttttaaaaagcatattaaagga
ttgcaggtcgtagcggtttacggcggtgcatccatttcgttgcaaataaaagatattcgc
agaggcgcacaggttgtggtggcaacgcccggaagattgattgatttaattgaacgcaaa
gccatcaacctcgaacagataaaatatgtagtgttggacgaagccgatgaaatgctcaat
atgggctttcaggatgacattgaattcatcctgcaaaacacgccgaaccgcgatagcacg
tggcttttcagtgcaactatgccgaatgaaattcgcaaagtgagtaagcgctacatgaaa
gagccggttgaaattacggtgggtaaagtgaacacggcgaacaaaaatattgaccatcaa
tattatgttacatcagcaattcatcgttacgaaacgttaaagcgtttgatagattttaat
cccggtatttacggaattatctttacacgaaccaaagccgaagcgcaggaaattgcagag
aaactcacacgagaaggctacgatatcgatgccttgcatggcgacctttcgcagccgcaa
cgagacaaagtgatgaaccaattccgcgacagaagtttgcagctcttaatcgctacggac
gtggcggcgcgcggtattgacgtgaaagacattacacacgttatcaactacgagttgccc
gacgatgtggaagtttacacgcatcgcaccggacgtacggggcgcgcaggaaatacgggc
gttgcgattagcatcattcatcagcgcgaagcatacaagctccgccagattgaaaaaatt
attcagacacaaattaacaaagtagaaattccgtcgggtaaagatgtatgccgtaaacag
tttttttacttcatggataaattgttgaaggcggatatttcgcacggcgattatgaaacc
tatgtgccgatgctggaagaaaaatttgccgacatttccaaagaagaagtgctgaaacgt
gtggctgctttagagtttgaccgctttttgaaatactatgaaaatgctggcgatttgaat
gcgcgtattcaagaccgcaacgaacgcagaagcgacgacagaggtcgcggaagaaattca
cgtgacggcggaaggcgcgacagccgagactttcagggcgataccacaagactgttcatc
aacatcggtacaaaagacggcttttataaagcgagctttttacagttcattttagatatg
agcgatttgagaaaagacgtgctcggaagaatcgatatgaaagaaatgaacagttgggta
gaaattgataaacgagccgcgaatcaaatgatacgcgctttggacggcaagaattttaaa
ggaagaaaaattcgtatgaacgatgcggacagcggaggtggaagaagacgataa
DBGET
integrated database retrieval system
