Arachidicoccus sp. BS20: A9P82_03830
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Entry
A9P82_03830 CDS
T04406
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
arb
Arachidicoccus sp. BS20
Pathway
arb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9P82_03830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arb03400
]
A9P82_03830
DNA repair and recombination proteins [BR:
arb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9P82_03830
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9P82_03830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_DNA-bind
UvrA_inter
nSTAND1
AAA_21
AAA_29
AAA_16
nSTAND3
AAA_22
SLFN-g3_helicase
Viral_helicase1
RsgA_GTPase
DnaJ_CXXCXGXG
ATPase
AAA_18
NACHT
AAA_24
cobW
AAA_33
AAA_25
ATPase_2
Herpes_Helicase
T2SSE
AAA_19
Septin
AAA_14
RNA12
NB-ARC
SelB_WH2
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ANI88503
UniProt:
A0A191TIG4
LinkDB
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Position
complement(824721..827540)
Genome browser
AA seq
939 aa
AA seq
DB search
MAKNLSQKNAVQDNDIFVKGARTHNLKNVDVKFPRNKFIVVTGVSGSGKSSLTIDTLFAE
GQRRYAESLNAYVRQFMARMNKPDVDFIKGLCPAIAIEQKVTTRTPRSTVGSMTEIYDYL
RLLYARIGKTISPISGREVKKDDVDDVLKSIDKTSLGAKIYILSKFKQHSNRDTEEELQI
LMQKGFARILFFPKKKNETLELEQIEDVLSIDKNELKKKFSLNDVYLLVDRMIKKDFSEE
DFHRLTDSISTAFYEGEGEMQLLIDEKDLIPFNNKFELDGMVFEEPVPNLFSFNNPFGAC
PTCEGFGQVLGIDKELVIPDKRLSVFEGAVAPWKGEKMVWWKEQFIKKAHLFKFPIHKPY
SELTPEQIKVLWKGNSDVYGIDDFFKDVQQNLYKVQYRVLQSRYRGRTDCPDCDGYRLRP
EALYVKIGSKHIGELCRMPVKDLKLWFDELKLSKHENEIAKRLLIEIHQRLQTLLDVGLG
YLTLDRLANSLSGGESQRIQLTRSLGSNLTDSLYILDEPSIGLHSRDTDRLIKVLKQLKS
LNNTVVVVEHDEMMMREADHIIDMGPLASHLGGEVIAEGNYDAIIKNPESLTGKYLTGEY
KIEPPKTTRKFRSSIIIEGATQNNLKNIDVTFPLNVMCVVTGVSGSGKTTLVKQILYPAL
MKMKQGTTEKVGAHKALTGNIDEIQQIEIIDQNPIGKSSRSNPVTYIKAYDEIRNLFAKQ
HLAKIRGYQPKHFSFNVDGGRCDACKGEGEQTIEMQFLADVHLTCEVCKGKRFKEEVLEV
QYKNKSVYDVLEMSVDEAIEFFKDEKQLAKALQPLQDVGLGYIKLGQSSDTLSGGEAQRV
KLASFLGKGKGNGNILFIFDEPTTGLHFHDIKKLLASFNALIEQGHSLIIIEHNTDVIKS
ADWVIDLGPEAGDGGGSLVFAGVPKDLKKVKESFTGKYV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaatctatctcaaaaaaatgcggtgcaggacaatgatattttcgtaaaaggc
gcacgcacgcacaatcttaaaaatgttgatgtaaaatttccgcgcaataaattcattgtg
gttacaggcgtttccggcagcggaaaatcttcgcttacgattgacactttgtttgccgaa
ggacaacgtcgctatgcggaaagcctgaatgcttatgtgcgtcaatttatggcgcgaatg
aacaagcccgatgttgattttatcaaaggactttgtcccgcgattgcgattgagcaaaag
gttaccacgcgcacgccgcgcagcaccgtcggcagtatgacggaaatttacgattatctg
cgtttgttgtatgcaagaatcggtaaaactatttcgccaattagtgggagagaagtgaaa
aaagatgatgtggacgatgtattaaaaagcattgataaaacatcgctcggcgctaagatt
tatattctttcaaaatttaagcaacacagcaaccgcgacacagaagaagaacttcaaata
ctgatgcagaaaggctttgcgagaattttattttttccgaaaaagaaaaatgaaacactt
gaactggaacaaatcgaagatgtattgtcgattgataaaaatgaattgaagaagaaattt
tctttgaatgatgtttatcttttggttgacagaatgattaaaaaagatttttcggaagaa
gattttcatcgcttaacggattcgatttcaacagcattttacgaaggcgaaggcgaaatg
caattgcttattgacgagaaagatttaattcctttcaacaataaatttgagttggacgga
atggtgtttgaagagcctgtgccgaatttgttttcattcaataatcctttcggcgcgtgc
ccaacctgcgaaggtttcgggcaagtgttgggcattgataaagagctcgtcattcccgat
aaaagattgagtgtctttgaaggcgcggttgcaccgtggaaaggagagaagatggtttgg
tggaaagagcagttcattaagaaggcgcatctcttcaaatttcctattcataagccttat
agcgaattgacacccgaacaaatcaaggttttatggaaaggcaacagcgatgtttatggc
attgatgatttctttaaagacgtgcagcagaatttatataaagttcagtatcgcgtattg
caaagccgctatcgcggacgaacggattgtcccgattgcgatggttatcgtttgcgcccc
gaagcgttgtatgtgaaaatcggaagcaaacatatcggcgaactttgccgtatgcccgtg
aaagatttaaaactttggttcgatgaattgaaattatcaaagcacgaaaatgaaattgca
aaaagattgttgatagaaattcatcaacgcttgcaaaccttgctggacgtaggtttgggc
tatttgactttggatagattggcaaattcgttaagcggcggcgaaagccaaagaatacaa
ttaacgagaagtttaggtagtaatttaacagattcgttatacattctcgacgagccttcc
atcggtttgcattcgcgcgatacggacaggttaatcaaagtattgaagcaattaaaatcg
ctcaacaatacagtcgttgtagttgaacacgatgaaatgatgatgcgcgaagctgaccat
attatcgatatgggacctttggcttcacacctcggcggcgaggtaattgcagaaggaaat
tatgatgccattatcaaaaatccggaaagtcttacaggaaaatatctgacaggcgaatac
aaaatcgaaccgccgaaaaccacgagaaaatttcgttcaagcattatcattgaaggcgct
acgcaaaacaatctgaagaacattgatgtaacttttccattgaacgtaatgtgtgtggta
acgggtgtttctggcagcggcaagacgactttggtaaaacaaattctttatcctgcgtta
atgaaaatgaaacaaggcacgactgaaaaagtgggtgcgcacaaagcgcttacgggcaat
attgacgagattcaacaaatagaaatcattgaccaaaacccgataggaaaatcatcgcgg
agtaatcccgttacttacattaaagcgtatgacgaaatcaggaatttatttgcaaaacag
cacttggcaaaaattcgcggctatcaaccgaaacacttttcgttcaatgtggatggcggt
cgctgcgatgcgtgcaaaggcgaaggcgaacaaactatagagatgcaatttcttgcggat
gttcacttgacttgtgaagtgtgcaaaggcaaacgtttcaaggaagaagtattggaagtt
cagtacaaaaataaaagtgtgtacgatgttttggaaatgagtgtggacgaagcgattgaa
ttttttaaagatgaaaaacaattggcgaaagcgctgcaacccttgcaggacgttggtttg
ggctacatcaagctcggtcagtcatccgacacgttgagcggcggcgaagcgcagcgcgtg
aagctcgcaagttttttgggcaaaggaaaaggcaacggaaatattttattcatctttgat
gaacctacgacgggattgcattttcatgatattaaaaaactgcttgcatcgttcaatgca
ttgatagaacaaggacattcactaatcattattgaacataataccgatgtgattaagtcc
gcagattgggtcattgatttaggtcccgaagcgggcgacggtggcggaagccttgtgttt
gcgggcgttccgaaggatttgaaaaaggtaaaagagagttttaccgggaaatatgtctga
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