Arachidicoccus sp. BS20: A9P82_07610
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Entry
A9P82_07610 CDS
T04406
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arb
Arachidicoccus sp. BS20
Pathway
arb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9P82_07610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arb03019
]
A9P82_07610
03400 DNA repair and recombination proteins [BR:
arb03400
]
A9P82_07610
Enzymes [BR:
arb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9P82_07610
Messenger RNA biogenesis [BR:
arb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9P82_07610
DNA repair and recombination proteins [BR:
arb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9P82_07610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_Crp_2
Fe_dep_repress
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANI89168
UniProt:
A0A191TKD4
LinkDB
All DBs
Position
complement(1695072..1696976)
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AA seq
634 aa
AA seq
DB search
MPTPIDILKTYWGFSAFRGEQENIIRAVLQKKDVLALLPTGGGKSVCFQIPAMMSDGVCL
IITPLIALMKDQAENLKNKGISACAIHSGLSNDEVSDELENAVRGDYKFLYISPERIDTS
AFQRVVEVLNVNLIAVDEAHCISQWGYDFRPSYLRIVELKKYFPGVPMLALTASATPNVQ
KDIVEKLLFKNYEVFRSSFQRPNISYEVIFCDNKIDKLSKILLQQNGSAIVYCKTRRLTQ
DVSKLLRIKNIDADFYHAGLSQEIRDAKQQNWMQNKTRVIVCTNAFGMGIDKPDVRIVAH
YDAPDCLENYYQEAGRAGRDGKAARAILLYQNRDIKDLKSLPDVRFPKFDEIKKAYQHLC
DFLQIPIGIGEGNFYDFDFNTFIKNFKLDAVQTIYCIKALEQAGFISFNENIFLPSKVGF
TIDKESLFDFENNYPAYEPLIKVLLRSYDSIFSYRVSVFEKQLARLLCISGEAVTQQLQA
LQRFGVLEYLPKKETPQIFFLTNRAPAEFLLFNHEDYLKRKKIFVNRVEKMLQYIHTNTC
RSVFIAQYFGDENTQRCGVCDNCTESKNEKLSAKEFASITSEILHLLKQKSSLDTKGLIN
ELNNFSSEKVKETLRYLRSERKIKMDVVGNFSLH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgcctacaccgatcgacatattaaaaacttattggggcttttccgcttttcgcggcgag
caggaaaatattatccgcgcggttttgcaaaagaaagatgtgcttgcgctgttgcccacc
ggcggtggaaaatctgtctgtttccaaattcccgcgatgatgagcgacggcgtttgcctc
atcatcacaccattgattgcgttgatgaaagaccaagccgaaaatctcaaaaacaaaggc
atttctgcctgcgccattcattcaggtttgagcaacgatgaagtctcggacgaattggaa
aatgccgtgcgcggcgattataaatttttatacatttctcccgaacgtattgatacgtct
gcgtttcagcgagttgtcgaggtgctaaatgtgaacttaattgctgttgatgaagcacat
tgtatttcacaatggggctacgattttcgtccgtcgtatttgcggattgtggagttgaaa
aaatattttcccggtgttccgatgcttgctttgacggcttctgcaacgccaaatgttcaa
aaagatattgtcgaaaaattgttgttcaaaaactacgaagtttttcgtagctcgtttcag
agaccgaatatttcttacgaagtaattttttgcgataacaaaattgacaagctctcaaaa
attttattgcaacaaaacggcagcgccattgtttattgcaaaacacgaagacttacgcaa
gacgtaagtaaattattacgaataaaaaacattgatgcggatttttaccacgcgggactt
tcgcaggaaattcgtgatgcgaaacaacaaaactggatgcaaaataaaacgcgcgtgatt
gtttgcaccaacgctttcggcatgggcatagacaagccggatgtaagaattgtagcacat
tacgatgcgcccgactgcctggaaaattattatcaggaagcaggacgcgcggggcgcgac
ggcaaagctgcaagagccattttgctgtatcaaaatcgcgacataaaagacctgaaatcc
ttgccggatgtgcgttttccgaagtttgatgaaattaaaaaagcgtatcagcatctttgt
gattttttgcaaattcccattggcattggcgaaggaaatttttacgatttcgattttaat
acgttcatcaaaaactttaagctcgatgctgtgcaaaccatttattgcatcaaggctttg
gagcaggcaggctttatttcgtttaatgaaaatatttttcttccgtcgaaagttggcttt
acgattgacaaggaaagtctgtttgattttgaaaataattatcccgcatacgaaccttta
attaaagtattattgcgcagttacgacagtattttttcttaccgcgtttctgtttttgaa
aagcaattggcgaggttgctatgcatttccggagaagcagtaacgcagcaactgcaagca
ttacagcgatttggcgtgcttgaatatttaccgaaaaaagaaacgccgcaaatatttttt
cttaccaatcgtgcgcccgcggaatttcttttgttcaaccacgaagattatttaaagcgg
aaaaaaatatttgtcaatcgtgttgaaaaaatgctgcaatatattcacaccaatacttgc
agaagcgtttttattgcgcaatactttggcgatgaaaatacgcagcgttgcggtgtttgt
gacaattgcacagagtcgaaaaatgaaaaattatctgcgaaagaatttgcgtcaatcact
tcggaaattttgcatttattgaagcaaaaatcttctctcgatacgaaaggtttgataaat
gaattgaataatttttcttccgaaaaagtgaaagagactttgcgctatttgcggagtgag
cgaaaaattaaaatggacgttgtggggaatttttcattacattaa
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