Arachidicoccus sp. BS20: A9P82_07900
Help
Entry
A9P82_07900 CDS
T04406
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
arb
Arachidicoccus sp. BS20
Pathway
arb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9P82_07900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arb03021
]
A9P82_07900
03400 DNA repair and recombination proteins [BR:
arb03400
]
A9P82_07900
Enzymes [BR:
arb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9P82_07900
Transcription machinery [BR:
arb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9P82_07900
DNA repair and recombination proteins [BR:
arb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9P82_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ANI89220
LinkDB
All DBs
Position
complement(1752460..1756263)
Genome browser
AA seq
1267 aa
AA seq
DB search
MSSTKLHNRVSFGKTKHLAETPDLLDIQLESFREFFQLETTPDKRNNEGLFRVFKENFPI
TDTRNIFVLEFLDYFVDPPRYSIEECMERGLTYAVPLKAKLRLSCNDEEHIDFQTIVQDV
FLGNIPYMTPRGTFVINGAERVIVSQLHRSPGVFFGQSTHPNGTKIYSARVIPFKGAWME
FATDINNVMYAYIDRKKKFPVTTLLRSIGFETDKDILTLFGMATEVPADKKALEKHIGQK
LAARVLKAWVEDFVDEDTGEVVSLERNEVVLERDTILDEEAIQVIADLEVKSVFIQREDV
GGDYAIIYNTLNKDTTNSELEAVQFIYRQLRGADAPDNETARGIIDKLFFSDKRYDLGEV
GRYKINRKLEVKQKLGTKVLTKEDIIEIIKYLVRLTNGKAEIDDIDHLSNRRVRTVGEQL
YAQFGVGLARMARTIRERMNVRDNEVFTPVDLINARTLSSVINSFFGTSQLSQFLDQTNP
LSEITHKRRISALGPGGLSRERAGFEVRDVHYSHYGRLCTIETPEGPNIGLISTLCVHAK
INDMGFIETPYHEVHDGKVDLKHLRFLSAEEEDTAKIAQSSVPLDDKGVFIEDRIISRET
GDFPVLDKSEVEFMDVAPNQIVGLSASLIPFLEHDDANRALMGSNMQRQAVPLLLPQAPI
VGTGLEGKAARDARIQIHAEGDGVVEFVDAREVHVRYNRNDADRLVSFEDDLVVYRLTKF
IKTNQATSINLRPAVKKGQVVKKGDFLTEGYATKDGELALGRNLQVAFMPWKGYNFEDAI
VINEKVVREDLFTSVHIEEYELEVRDTKLGEEELTSDIPNISEEATKDLDEHGIIRIGAT
VREGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDAKDASLKAPNGTEGVVIDKKLFQR
AKKDKNSKVREKAQLEKIEKTHQENAAAVKELLLSKLQSLLKDKTSTGVSNNFGEVLIGK
GAKFNSKNLNGVDYQNVNPLGWTGDETVDSQINILLHNYNIKYNEELGRYKREKFNISIG
DELPAGVLKLAKVYLAVKRKLKVGDKMAGRHGNKGIVAKIVRAEDMPFLEDGTPVDIVLN
PLGVPSRMNLGQIYETILGWCGKKLNMKFATPIFDGASPEEIAKYCEDAGIPSMGHTYLY
DGETGERFDQKATVGVIYMIKLHHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEM
EVWALEAYGASNILQELLTIKSDDIIGRAKTYEAIVKGDNIPRPSVPESFNVLVHELRGL
GLDLRFE
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaacaaaacttcacaacagggtcagctttggtaaaacgaaacaccttgctgaa
acacctgatttattagacattcagttagaatctttccgcgaatttttccagttagaaaca
acgcccgacaagcgtaacaacgaaggtcttttccgtgtattcaaggaaaatttccctatc
acggacacgcgtaacattttcgtgctggaatttttggactatttcgttgacccgccgcgt
tattccattgaagaatgtatggaacgtggtttaacgtatgcagttcctctgaaagccaag
ttgcgcttgagctgtaatgacgaagagcatatcgatttccagacaattgtacaggacgtt
ttcttgggaaatattccgtatatgacgccgcgtggtacattcgttatcaatggtgctgaa
cgtgtaattgtttctcagttgcatcgttctcccggtgtattcttcggacaatcaacgcat
ccaaacggaacaaaaatttattctgcccgcgttattcctttcaaaggtgcgtggatggaa
tttgctaccgacatcaacaatgtgatgtacgcatacatcgaccgtaagaagaaattcccg
gttactactttgctgcgttctattggcttcgaaacggataaagatattttgactttgttc
ggtatggcaacagaagttcctgccgataaaaaggctttggaaaaacacatcgggcaaaaa
ctcgctgctcgtgtattaaaagcatgggtagaagattttgtggatgaagataccggagaa
gttgtgtcgctcgagcgtaatgaggttgtgttggaacgcgataccattttggacgaagag
gcaattcaggtaattgccgatttggaagtgaaaagcgtgttcattcagcgtgaagatgtt
ggcggcgattacgcaatcatctacaacacattgaataaagatactaccaattctgaactg
gaagcagttcaatttatttatcgtcagttgcgtggtgcagatgcgccggataacgaaacc
gctcgcggtatcattgacaaattgttctttagcgacaagcgttacgatttaggcgaagtg
ggtcgttacaaaatcaaccgcaagcttgaagttaagcagaaattaggaacgaaagttctt
accaaagaagatattattgaaatcatcaaatatttggttcgccttacaaacggtaaagcc
gaaatagatgatattgaccacttgagcaatcgtcgtgtacgtacagtaggcgagcagttg
tacgctcagtttggcgtaggtttagcgcgtatggcgcgtaccattcgcgagcgtatgaac
gtgcgcgacaatgaagtatttacgccggttgatttgattaatgcaagaacattatcttcc
gttatcaattccttcttcggaacttctcagttgtcgcagtttttagaccaaaccaatcca
ttgtcggaaattacgcacaagcgtcgtatctccgcgctcggaccgggcggtttgagccgt
gaacgtgcgggctttgaagtgcgcgacgtgcactattcccactatggtcgtttgtgtacg
attgaaacgccggaaggaccgaacatcggtttgatttctacgctttgcgttcatgcgaaa
atcaacgatatgggctttatcgaaacgccttatcacgaagtgcatgatggtaaagtagat
ttgaaacatttaagattcctgagtgcagaagaagaagatactgcaaaaattgcacagagc
agcgtgcctttggacgataaaggtgttttcatagaagacagaatcattagccgcgaaacg
ggcgatttccctgtactggacaaaagtgaagtcgaattcatggacgttgcgcccaaccaa
attgtaggtttgtccgcgtctttgattccgttcctcgaacatgacgatgccaaccgtgcg
ctaatgggttcaaatatgcaacgtcaggcggttccgttattgcttccgcaggcgccgatt
gtaggtacaggtctggagggcaaagcggctcgcgacgcacgtatccagattcatgcagaa
ggcgatggtgttgtagaatttgtagatgcacgtgaagttcacgttcgttataatagaaat
gacgctgaccgtttggtttcttttgaagatgatttggtggtatacagattaaccaaattt
atcaaaaccaaccaggcaacttccatcaacttgcgccctgctgtgaagaaaggacaagtt
gtaaagaaaggcgatttcttgacagaaggttacgctacaaaagatggcgaattggctctg
ggtcgtaacttacaggttgcgtttatgccgtggaaaggttacaactttgaagatgcgatt
gtaatcaacgaaaaagttgttcgtgaagacttgtttacttctgttcatattgaagaatat
gaattggaagtacgcgatacaaaactcggcgaagaagaattgacatccgatattccgaat
atttccgaagaagccactaaagatttggatgagcacggaattatccgcatcggtgcaaca
gttcgtgaaggcgatattctgatcggtaaaatcactccgaaaggagaaagtgacccgacg
ccggaggaaaaattacttcgcgcaatctttggagataaagccggcgatgcaaaagatgct
tctctgaaagcgccaaacggaacggaaggtgtggttatcgacaagaaattattccaacgc
gctaagaaagataaaaacagcaaagtgcgtgaaaaagcgcaattggaaaaaatagaaaaa
acgcatcaggaaaatgccgcggctgtaaaagaattgttgttgagcaaattgcagagtttg
ttgaaagacaaaacttccacaggtgttagcaataacttcggcgaagtattaatcggcaag
ggggctaaattcaacagcaaaaacctgaatggcgttgattatcaaaatgtaaatccgttg
ggttggaccggtgatgaaacggttgatagtcaaatcaacattttgttacacaactataat
atcaaatacaacgaagaacttggacgttacaagcgtgaaaagttcaacatatctatcggc
gatgaattgcctgccggtgtgttgaaacttgccaaagtatatcttgctgttaagcgtaag
ctgaaagttggcgataaaatggcaggtcgccacggtaataaaggtattgttgcaaaaatt
gtacgtgcagaagatatgccgttccttgaagatggaactccggttgatattgtattgaac
ccgttgggtgtaccttcgcgtatgaaccttggacagatttacgaaaccattctcggatgg
tgcggtaaaaaactgaacatgaaatttgctacgccgattttcgacggcgcttctcctgaa
gaaattgcaaaatattgcgaagatgcaggaatcccgtcaatgggtcatacctacttgtac
gatggagaaaccggcgaacgttttgaccagaaagctactgtgggcgttatctacatgatt
aagctgcaccacatggtggatgacaaaatgcacgcacgttctattggaccatacagcttg
attacgcaacagcctttgggcggtaaagcgcaattcggtggtcagcgtttcggggaaatg
gaagtatgggcgctcgaagcttatggcgcatccaacattttgcaggaattgctgacaatc
aagtctgacgatattatcggtcgtgcgaaaacgtatgaagctattgtgaaaggcgataat
attcctcgtccgagcgttcctgaatcattcaatgtattggttcacgagttgcgcggttta
ggattggatttaagatttgaatag
DBGET
integrated database retrieval system
