Arachidicoccus sp. BS20: A9P82_07990
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Entry
A9P82_07990 CDS
T04406
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arb
Arachidicoccus sp. BS20
Pathway
arb03420
Nucleotide excision repair
arb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9P82_07990
03430 Mismatch repair
A9P82_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arb03400
]
A9P82_07990
Enzymes [BR:
arb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9P82_07990
DNA repair and recombination proteins [BR:
arb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9P82_07990
MMR (mismatch excision repair)
Other MMR factors
A9P82_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANI89235
LinkDB
All DBs
Position
complement(1782876..1785254)
Genome browser
AA seq
792 aa
AA seq
DB search
MQDYLKGLNEQQYEAATHINGPLMIVAGAGSGKTKVLTTRIAHLMAQGVDAFNILALTFT
NKAAAEMKERIEKMLGNHEARNLYIGTFHSVFARILRGEAHRLGYPNSFTIYDGDDSKSV
LKTVIKEMELDEKHYKPNIVASRISQAKNSLIGPLQYAEDYYIQQEDMRANRPAIAKIYE
AYAKRCFKNGAMDFDDLLLKMYELLNTFPEVLHKFQHKFKYVLIDEYQDTNPVQYQITKL
LAAAHENICVVGDDAQSIYSFRGATIENILQFQKDYDDVKVVKLEQNYRSTKSILNVANA
VIQNNKGQIPKALWTDNSDGEKIYLVRTMTDNDEGKFVASTIQEQKLRNHYNNSDFSILY
RTNAQSRSYEENLRRAGIPYKIYGGLSFYQRKEIKDFIAYLRVIGNTRDEEALKRIINYP
VRGIGKTTMEKLQTIANESNITLWETLERAGEFGAKGGGLESIKNFVTMIRYFQSLLKEK
NAFEVATEMGKHTGLIKELFSDKTTEGLARYENVQELLNSIREWVDTQDSLSQIDEDGIL
IDNVSTEDTKNAQSLGVYLQQITLLTDADKDDGTGDVVKLMTIHAAKGLEFPVVFVGGLE
ETLFPSGMSINTREELEEERRLFYVAVTRAKSKLWLTYANTRYRFGNLVQNDPSRFIDEM
PKELVDRKNAGGSAYTSSGLNNGNAFGFRNNSATEAERRYGPPPVPKTKTTSSLPSQPPV
APRVIEHKPQGEFVPSDTSDLAEGDKVEHQKFGFGIVVKMEGAAHNRIATVNFNLNGEKK
IMLNYAKLKIIR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcaagactatttaaaaggactgaacgagcaacaatacgaagccgccacgcacatcaac
ggaccattgatgattgtcgcaggagcgggtagcggcaaaacaaaagttttaactacacgc
attgcccatttgatggcgcagggcgtggatgctttcaatattctcgcgcttacatttacc
aacaaagctgcggcggaaatgaaagagcgtatcgaaaaaatgttgggaaatcacgaagca
cgaaatttatacatcggtacgtttcatagtgtgtttgcgcgcattttgcgtggcgaagca
catcgtttgggttatccgaacagctttacaatttacgatggcgacgacagtaaaagcgta
ctgaaaaccgttatcaaagaaatggaactggacgaaaaacattataagccgaatatcgtt
gcgagcagaatttcccaagcaaaaaactcattaatcggacctttgcaatacgccgaagat
tattacattcagcaggaagatatgcgcgccaaccgtccggcgattgcgaaaatttacgaa
gcttacgcgaagcgttgcttcaaaaacggcgcaatggattttgacgatttattgctgaaa
atgtatgaactcctgaacacgtttcccgaagtgctacacaagtttcagcacaagtttaaa
tatgtattgattgatgagtatcaggacacaaatcccgtgcagtatcaaattacgaaattg
ctggctgcggcacacgaaaatatttgcgtagtgggcgatgacgcgcaaagcatttacagt
tttcgcggggctacgattgaaaatattttacagttccaaaaagattatgacgatgtaaaa
gtggtaaagctggaacagaattaccgcagtacaaaaagcatcttgaatgttgcgaacgcc
gtgattcaaaacaataaaggacaaataccgaaagccttgtggacagacaattccgacggc
gaaaaaatttatctcgtccgcacaatgactgacaatgatgaaggtaaatttgtcgcctca
accattcaggaacaaaagcttcgcaatcattacaacaacagcgatttttctattttgtac
agaaccaatgcgcaaagccgctcgtatgaagaaaacctgcgtcgagcgggtattccgtac
aaaatttacggcggcttgagcttttatcaacgaaaagaaatcaaagattttattgcatac
ttgcgcgtcattggcaacacgcgcgacgaggaagcgttgaaaagaattatcaattatcct
gtgcgcggcatcggcaaaaccacaatggaaaaattgcaaaccattgccaatgaaagtaac
atcacgctttgggaaacgctggaacgcgcaggcgaatttggcgcgaaaggcggcggcttg
gaatcgattaaaaacttcgttaccatgattcgttattttcaatctttattaaaagaaaaa
aatgcctttgaagtagcaacggaaatgggcaaacatacaggtttgataaaagaattgttc
agcgataaaactacggaagggttggcacgttatgagaacgtgcaggaattactgaactct
attcgtgagtgggttgatacgcaagattcgctttcgcaaatcgatgaagacggcattttg
attgataatgtaagtaccgaagacaccaagaacgcgcaatcgctcggcgtgtatttgcag
caaattactttattgacagatgccgataaagacgatgggacaggcgatgttgtaaaactg
atgacgatacatgcagctaaaggtttggaatttcctgtggtgttcgttggcgggctggaa
gaaacattgtttccaagcggaatgagcatcaatacgcgagaggaattggaagaagaacgc
cgattgttttatgtggctgtaacccgtgccaaatcaaagctctggctcacgtatgccaat
acgcgctatcgttttggcaatcttgtgcagaacgacccaagccgttttatagatgaaatg
cccaaagaattagttgacaggaaaaatgcaggaggcagtgcttatacgtcgagcgggttg
aacaatggaaatgctttcggcttccgcaataacagtgcaaccgaagcggaaagaagatac
ggtccgccgccggttcctaaaacaaaaactacatcttcgttgccatcgcagccgcctgtt
gcaccaagagtaattgagcataaaccgcagggcgaatttgtcccaagcgatacaagcgac
ttagccgaaggcgataaagtagaacatcaaaaattcggtttcggaatagttgtaaaaatg
gaaggcgccgcgcataacagaattgcaacagttaattttaatttgaacggcgaaaagaaa
attatgctgaattatgcaaagctgaaaattatcaggtaa
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