Arachidicoccus sp. BS20: A9P82_12795
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Entry
A9P82_12795 CDS
T04406
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
arb
Arachidicoccus sp. BS20
Pathway
arb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9P82_12795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arb03400
]
A9P82_12795
DNA repair and recombination proteins [BR:
arb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9P82_12795
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9P82_12795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_21
DnaJ_CXXCXGXG
AAA_33
nSTAND3
Viral_helicase1
AAA_18
ATPase_2
AAA_22
SLFN-g3_helicase
T2SSE
cobW
Spb1_C
NMDAR2_C
CA109-like
Motif
Other DBs
NCBI-ProteinID:
ANI90082
UniProt:
A0A191TN00
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Position
2942805..2945699
Genome browser
AA seq
964 aa
AA seq
DB search
MRQKDIIASNESIEVIGAREHNLKNIDINIPKNKLVVFTGVSGSGKSSLAFDTIYNEGQR
RYMESFSAYARQFMGDMERPDVDKISGLSPVISIEQKTTNRNPRSTVGTVTEVYDFLRLL
YARIGEAFSYNTGKKMVKFSEEEIVEDVYKKFFNQKITILAPIVRGRKGHYRELFEETRK
KGFLKVRVDGEVQDIKANMQVDRYKIHDIEIVIDRIQVTKEFKIRLSQSVQQALKLGKDL
VFILSNDDDKVQQYSKQLVCADTGISYEEPSPNSFSFNSPYGACPVCKGLGEVYAISPDE
ILPNKSLSVKDGGIAPLGEERSASVFQQVAQFARKHKISLDKPLKDLSEAQIDLLLFGDG
NAKREYEVDTDDETIPQTYTGSYEGIVPMLKRWFSSSGSTDHLREWTQKFMELKTCTECN
GQRLKKESLWFKIDKRNIAELSELDLDILMSWFVDIEKRLSDKQNAIAKDILKEIRERLQ
FLLNVGLTYLTMNRPTRTLSGGESQRIRLATQIGSQLQGITYVLDEPSIGLHQRDNHRLI
SALENLRNIGNSVLVVEHDKDIMLASDYLVDIGPRAGIHGGEIVFAGTPHEALKANTNTA
QYISGKKKIEIPKTRRKGNGKFIEIKGAKGNNLQNVSVKFPLGELIVVTGVSGSGKSTLI
NETLYPILSQYCYKSKTNPLEYKSVKGLEHIDKVIEIDQSPIGRTPRSNPATYCGFFTDI
RQLFASLPEAKIRGYNAGRFSFNVKGGRCDVCEGGGMRVIEMNFLPDVYVPCEKCNGKRY
NRETLEIRYKGKSISDVLNMTVDEAVEFFQPVPSLYRKIKTLQDVGLGYISLGQSAVTLS
GGEAQRVKLSTELAKKDTGKTFYILDEPTTGLHFSDIQHLLNVVNKLVDRGNSVLIIEHN
LDVIKVADHIIDLGPEGGKGGGKILFEGTPEEMLKHKTSFTAKYLKEEMSLPNPSKGGAD
EAKI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaaaagacattatcgcgtccaacgaatctatcgaagtcattggtgcgcgcgaa
cacaatctgaaaaatatcgacatcaacatccctaaaaacaaactcgttgtttttacgggc
gtctcgggtagcggaaaatcttcgctcgcgtttgatacaatttataacgaagggcaacgc
cgttatatggaaagtttcagcgcgtatgcgcggcaatttatgggcgatatggaacgtccc
gacgtagataaaatttcaggattaagccctgtaatttccattgaacaaaaaaccacgaac
agaaatccacgttcaacggttggcacagttacggaagtgtatgattttctgcggttgctg
tatgcgagaattggcgaggcttttagctacaacacaggaaaaaagatggtcaagtttagc
gaggaagaaattgtggaagatgtctataaaaaattcttcaatcagaagataaccattctc
gcgcccattgttcgcgggcgcaaaggacattaccgcgaactgtttgaagaaacacgcaag
aaaggttttctcaaagtgcgcgtagatggcgaagttcaggacattaaagccaatatgcaa
gtggacagatacaaaatccacgacattgaaattgtgattgacaggatacaggtaacgaaa
gaatttaagattcgtttgtcgcaaagtgttcagcaggctttgaagttgggaaaagatttg
gtattcattttaagcaatgatgacgataaagttcagcaatactctaaacaattagtttgt
gccgatacgggcatcagttatgaagagccttcgcccaattctttctcgttcaattcaccg
tacggtgcgtgtcctgtatgcaaaggtttgggcgaagtttacgcgattagtccggatgaa
attttaccgaacaaatcattaagcgttaaagacggtggcattgcaccactcggcgaagag
cgcagcgcgagcgtgtttcagcaggttgcacagtttgcccgcaaacataaaataagtttg
gataaaccattgaaagatttgagtgaagcgcaaattgatttgctcttgttcggcgacggc
aatgcaaagcgcgagtatgaagtggacacggatgatgaaactattccgcaaacatataca
ggcagttatgaaggaattgtgccgatgctgaaacgttggttttcttcatcgggaagcact
gaccatttgcgcgaatggacgcagaaattcatggaattaaaaacctgcacggaatgtaac
ggacaacgtttgaaaaaagaaagcctttggtttaaaatcgataaaagaaatattgccgag
ttgagtgaactcgatttggatattttgatgagttggtttgtggatatagaaaaaagattg
agcgataaacaaaacgccatcgcaaaagatattctcaaagagattcgtgagcgcttgcaa
ttcttattaaatgtcggcttgacttatcttacaatgaatcgtcctacacgaactttgagc
ggcggcgaaagccagcgcatcaggcttgcaacgcagataggttcacagttacagggcatt
acgtatgtgttggatgaaccatcaattgggttgcatcaaagagacaatcaccggttgatt
tcggcgttggaaaatctgcgcaatatcggcaacagcgttcttgttgtggagcatgataaa
gacattatgctggcatcggattatctcgtggatattggtccgcgtgcaggcattcacggc
ggcgaaattgtttttgccggcacgccgcacgaagcgttaaaagcgaataccaatacggcg
caatacatcagcggaaaaaagaaaattgagataccaaaaacacgcagaaaaggcaacgga
aaattcatcgaaataaaaggtgcaaaaggcaataacctgcaaaacgtttccgtgaaattt
cctttgggcgaattgattgtggttacaggcgtttcgggttccggaaaatctacgttgatt
aatgaaacgctgtatccgatactttcgcaatattgttacaaatcaaaaacaaacccgctg
gaatataagtcagtaaagggtttggagcatattgataaagtaatagaaattgaccaatcg
ccgatcggtcgtacgccgcgaagtaatcctgcgacgtattgcggcttctttacggacatt
cgacaactgtttgcatcgttgcccgaagcgaagattcgcggctataatgcgggaagattt
tctttcaatgtaaaaggcggtcgctgcgatgtttgcgaaggtggcggaatgcgtgtgatt
gaaatgaattttttgcccgatgtatatgtaccttgcgaaaaatgcaacggtaaaagatac
aaccgcgaaactttggaaattcgttacaaaggaaaatccatcagcgatgtattgaatatg
acggtggatgaagctgttgaattttttcaacctgttccgtctttatacagaaaaataaaa
acgttgcaggatgttggtttgggttatatcagtctcgggcaatcggctgtaacattgagc
ggcggcgaagcgcagcgtgtaaaactttcaaccgaattagcaaaaaaagatacgggaaag
actttttacattcttgacgaacccacgacaggactgcatttcagcgacattcaacatttg
ctgaacgtggtgaataaattggttgacagaggaaattctgttttaatcatcgagcataat
ttggacgtgataaaagttgccgaccacattattgatttaggtcccgaaggcggcaaaggc
ggcggaaaaattttatttgaaggaacacccgaagaaatgctgaaacataaaacgagcttt
acggcgaagtatttgaaagaggaaatgagcctccccaacccctccaaaggaggggctgat
gaagcgaagatttaa
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