Arcobacter sp. L: ABLL_0894
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Entry
ABLL_0894 CDS
T01834
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
arc
Arcobacter sp. L
Brite
KEGG Orthology (KO) [BR:
arc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arc03400
]
ABLL_0894
DNA repair and recombination proteins [BR:
arc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABLL_0894
Archaeal homologous recombinant proteins
ABLL_0894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
CATRA-C
SMC_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAK72769
LinkDB
All DBs
Position
complement(930038..933619)
Genome browser
AA seq
1193 aa
AA seq
DB search
MKILKIKSLNINSLKGEFEVDFEKFLKDESLFAITGPTGAGKSTILDVITCALYGRTARL
TNPNELMSRHTGECLCEVEFEVKGKVYRSSWSQKRARKSPDGAFQSAKMEVSEVESGKVL
ESYLSKVPKYIEELSGLDFDRFIQSMMLAQGSFDAFLKARENERSSLLEKITGTQIYKQI
SQEIFKTYTSKNDEIKLDENLLGNIELLSNEIVNEKTLVLNNSKVKKLELDTKGNELKKV
INWLENLQKLEADNTKYIQEFEKITLEKENKKEDFVKLDLANKALNIQPIYQEKNSLTQI
INQDKEKLEKLQKELEDLKQLLQSKTNESLKTKDELDKEKVSFDTNSRKLQEVRTLQTRI
ESKLQNIKDLENKISSQNEQKTKLNEELKVLKINQEKIENDLKTINDYLIKNKDDESLKE
EISLISKNVNDFKDIVKLLKQIEEKLQKNSLDEKTLQDSFTKAKKEFDEIKVLFDSKDKE
YKDLEIQTLNFNQKEINNRDRLKSIEKLITSIDEYKRLLESILKEENIISSSKDESKTIK
TNIEEKTKLINEIQTHIQTLNDKREAELLIAKYESDRVNLKEGEECFLCGSKEHPFVDHK
ININADETTSIIAQKKQIFDEENRALRTIELNLSKLETKVESSTLELNKLSKNKEDIEQV
FSSLNFILTDDSKINLEEEKQILEEELKNIVKIRDEKEKVLAQRDNFQKELNTKQTLVSQ
NEQELYKLKSLIEQLQNEQTLNISKKQNLEEELSKVYIKYELIFEENFEENFRILVAKKD
SFIKHETSKKELDIKLQGLTIQRKELDTKIISIESSLKIDAEQLAKISTETIELQTQSKA
ILDVSDLDIFEKEITSKFNTINEKYNSLSKELVNLNSKNESLNTQIIELNQKQINDNTKL
EETKQNFNNALTENSFTSKEEFEKALLNKERREELSLMCKAIEEKYTQIQTLKIDTAKKL
SEQKELNLTDKELQNLNDESKELQTAIDELQKSIGSLEKELEINASNMKKHEDKIKELEK
KKEAFKVWIKLNEMVGSASGDKFAKFAQGITLDQLIYLANKHLQILSPRYELQRSSDSSK
LLEIEIIDGFQGDVVRPVSTLSGGESFIVSLSLALGLSALASQKISIDSLFLDEGFGTLD
SDSLELALNALNQLQSSGKMVGVISHVEALKERIPLQIRVMPKGDGTSLLSLN
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactaaaaataaaatcactaaatatcaattctttaaaaggtgaatttgaagta
gactttgaaaagtttttaaaagatgaatcattatttgctattactggaccaactggtgct
gggaaaagtactattttagatgtaattacttgtgctttatatggaagaactgcaagactt
acaaacccaaatgaacttatgagtagacatacaggggaatgtttatgtgaagttgaattt
gaagtaaaagggaaagtttatagaagttcttggagtcaaaaaagagctagaaaaagtcct
gatggagcttttcaaagtgctaaaatggaagttagtgaagttgaatcaggaaaagtttta
gaatcatatctttctaaagttccaaaatatatagaagagttatctggacttgattttgat
aggtttattcaatctatgatgttggctcagggaagtttcgatgcttttttaaaggcacgt
gaaaatgagcgttcaagtttacttgaaaaaattactggaacacaaatctataaacaaatt
tcacaagagatatttaaaacttatactagtaaaaatgatgagattaaattagatgaaaat
ttattaggaaatattgaattattgtcaaatgaaattgttaatgaaaagactttagtttta
aataattcaaaagtcaaaaaacttgaacttgatactaaaggaaatgagctaaaaaaagta
attaattggcttgaaaacttacaaaaattagaagctgataatactaagtatatacaagag
tttgagaaaattactcttgaaaaagagaataaaaaagaagactttgttaaattagattta
gcaaataaagctttaaatattcagccaatatatcaagaaaaaaattctttaactcaaata
ataaatcaagataaagaaaagctagaaaaacttcaaaaagagctagaagatttaaaacaa
ctcttacaatcaaaaacaaatgaatcattaaaaacaaaagatgaattagataaagaaaaa
gtttcatttgatacgaactctagaaagcttcaagaagtaagaacactacaaactagaata
gaatcaaaacttcaaaatataaaagatttagaaaataaaataagctctcaaaatgaacaa
aaaacaaaactaaatgaagagttgaaagtactaaaaataaatcaagagaagattgaaaat
gatttaaaaactataaatgattatctaataaaaaataaagatgatgaatcattaaaagaa
gaaatatctttaatctctaaaaatgtaaatgattttaaagatatagtaaaacttttaaaa
caaatagaagagaaacttcaaaaaaatagtttagatgaaaagactttgcaagatagtttt
actaaggcaaaaaaagagtttgatgagataaaagtactgtttgattctaaagataaagag
tataaagatttagaaatccaaactttaaatttcaatcaaaaagaaataaataatagagat
agattaaaaagtattgaaaaactaattacttctatagatgagtataaaagattgttggaa
tctattttaaaagaagaaaatatcatatcttcttcaaaagatgaatcaaaaactataaaa
acaaatatagaagaaaaaacaaaactaataaatgaaatacaaacccatatacaaactcta
aatgataaaagagaagcagaactattaatagcaaaatacgaaagtgatagagtaaatcta
aaagagggtgaagagtgtttcttatgtggttcgaaagaacatccatttgtagatcataaa
ataaatataaatgctgatgaaacaacttcaataatcgctcaaaagaagcaaatatttgat
gaggaaaacagagctttacgtactattgaattaaacttatcaaaactagaaactaaagta
gagagttctactttagaactaaataaattatcaaaaaataaagaagatatagaacaagta
tttagttcattgaatttcattctaacagatgattcaaaaataaacttagaagaagaaaag
caaattttagaagaagagttaaagaatatagtaaaaattagagatgaaaaagaaaaagtt
ttagctcaaagggataattttcaaaaagagttaaatacaaaacaaactttagtttctcaa
aatgaacaagaactttataaactaaaaagtttaatagaacagttacaaaatgaacaaact
ctaaacatatctaaaaagcaaaatttagaggaagaactttcaaaagtttatatcaaatat
gaactaatatttgaagaaaactttgaagaaaacttcagaattttagttgcaaaaaaagat
agttttattaaacatgaaacatcaaagaaagagcttgatataaaacttcaaggcttaaca
atacaacgaaaagagcttgatacaaaaatcatatcaatagagtcaagtctaaaaatagat
gctgaacaactggctaaaatctctacggaaacaatagaattacaaactcaaagtaaagct
attttagatgtatctgatttagatatttttgaaaaagagataacaagtaaatttaacact
atcaatgaaaaatataactctttatcaaaagagttagtaaatctaaattcaaaaaatgaa
tcgctaaatactcaaataatagagttaaatcaaaaacaaattaatgataatacaaaacta
gaagagacaaaacaaaatttcaataatgccttaacagaaaatagttttacttcaaaagaa
gagtttgaaaaagcacttttaaataaagaacgaagagaagaattatctttaatgtgtaag
gcaatagaagaaaaatatactcaaatccaaactctaaaaatagatacagcaaaaaaacta
tctgaacaaaaagagttaaacctaacagataaagaacttcaaaatttaaatgatgaatca
aaagagttgcaaacagctatcgatgaacttcaaaaatcaataggaagtttagaaaaagaa
cttgaaataaatgcttcaaatatgaaaaaacatgaagataaaatcaaagagttagagaag
aaaaaagaagcctttaaagtatggataaaactaaatgaaatggtaggttcagcaagtggt
gataaatttgctaaatttgctcaagggattacactagatcaactaatttatctagcaaat
aaacatctacaaatactaagtccacgatatgaacttcaaagaagtagtgattcaagtaaa
cttttagaaatagagataatagatggtttccaaggtgatgtagtaagacctgtaagtacg
ctttcaggtggtgaaagttttatcgtaagtctttcactagcacttggactttcagccctt
gctagtcaaaagataagtatagattcactttttttagatgagggatttggaacacttgac
agtgatagtttagaattagcactaaatgctctaaatcaacttcaaagttcaggaaaaatg
gtaggtgtgatttcccatgtggaagcactaaaagagcgaattccattgcagattagggtt
atgcctaagggtgatggaacaagtttgttaagtttaaattaa
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