Arcobacter sp. L: ABLL_1518
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Entry
ABLL_1518 CDS
T01834
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
arc
Arcobacter sp. L
Pathway
arc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABLL_1518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arc03019
]
ABLL_1518
03016 Transfer RNA biogenesis [BR:
arc03016
]
ABLL_1518
Enzymes [BR:
arc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABLL_1518
Messenger RNA biogenesis [BR:
arc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABLL_1518
Transfer RNA biogenesis [BR:
arc03016
]
Prokaryotic type
tRNA degradation factors
ABLL_1518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAK73393
LinkDB
All DBs
Position
1539882..1542056
Genome browser
AA seq
724 aa
AA seq
DB search
MATVCEFDLNGKQEVFEFEKVAKQANGAVLAKIGNAVVLATVVSEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFIKREGKPSDFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
DVDLQTLSLNAANAALYTSNLPIKKSVCGVRVGKIENELVINPTSEQLENSTLDLYVAGS
KDELLMIEMKTISSSELVEIDIEAFTKIHNTNEMDEESLVEAISFAQNALKESNLTYEKA
FEEVCKEKVEVELIKFTIDESVINYVRDNFSNEIKEAIKKLAKSERATQLKDVAKMISSN
EYCSTNELDFTTIYEAVSIVKREIVRNMIVSDKVRADGRGLKDVRPITIETNILPSTHSS
CLFTRGETQALVIGTIAGPKDGQMYEVLTDKSTSMERFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLAKKALEATIDDDYTETIRLVSEILESNGSSSMATVCGGSLALKAAGVPISDL
VAGVAMGMVVEGDNYSVLTDIMGLEDHDGDMDFKVAGTNKGITALQMDIKLGGIELSVLK
EALLQAKEGRVHILSLMNEAAKDIVPSEALPLVEQFAIDPSKIMVIIGKAGATIKEIIEK
FTVSIDLDRDSGTVKVSGGNKQNVLDACEHIKTISNNAPARKDAPKNVDFEKLYAVDEVV
TGKVERVVDFGAFILLPKGGEGLLHISKISKERVNNVSDVLSVGQEIEVKVLKVKKDRIE
LSSN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtttgtgaatttgatttaaatggaaaacaagaggttttcgaatttgagaaa
gtagcgaaacaagcaaatggcgcagttttagcgaaaatagggaatgctgtagttttagct
acagttgtaagtgaatttgataatcctgtaagtgaagattttactcctttaactgttcaa
tatattgaaaaaacttatgcagctgctaaattaccaggtggttttataaaaagagaaggt
aaaccaagtgattttgaaactttaacatcaagagtgattgatagaagtttaagacctctt
tttcctaaaggatatgtttatcctacaacaatcacagtaatggtattaagtgcagataaa
gatgttgatttacaaacattatcattaaatgcagcaaatgcagctttatatacttctaat
ttaccaataaaaaagtcagtttgtggagtaagagtaggaaaaattgaaaatgaattagtt
attaatccaacatcagaacaattagaaaattctactttagatttatatgtagctggttct
aaagatgaattattaatgatagaaatgaaaactatatcgtcaagtgaattagttgaaatt
gatatagaagcatttacaaaaattcataatacaaatgaaatggatgaagagagtttagtt
gaagctatttcttttgcgcaaaatgctttaaaagagtcaaatttaacttatgaaaaagct
tttgaagaagtatgcaaagaaaaagtagaagtagagttaatcaaatttacaattgatgaa
tcagttataaattatgtaagagataatttttcaaatgaaataaaagaggcaattaaaaaa
ttagcaaaaagtgaaagagctactcagcttaaagatgttgccaaaatgatatcttcaaat
gaatattgttctacaaacgaattagattttactactatttatgaagccgtttctattgta
aaaagagaaattgtaagaaatatgattgtaagcgataaagtaagagctgatggaagaggt
ttaaaagatgtaagaccaattacaattgaaactaatattttaccatcaactcactcttct
tgtttatttacaagaggtgaaacacaagcactagttataggtacaattgcaggacctaaa
gatggacaaatgtatgaagttttaactgataaatcaacttcaatggaaagatttatggta
cattataattttccaggtttttctgttggtgaagcaaaacctatgtttggtgttggcaga
cgtgaattaggacatggaaatttagcaaaaaaagcattggaagcaacaattgatgatgat
tatacagaaacaataagattagtttctgaaattttagaatcaaatggttcttcatcaatg
gcaactgtttgtggtggttcattagcactaaaagcagcaggtgtacctatctctgattta
gttgcaggtgttgcaatgggtatggttgttgaaggagataattattcagtattaactgac
attatgggattagaagatcatgatggtgatatggattttaaagtagcaggaacgaataaa
ggaattactgctttacaaatggatattaaattaggtggaattgaattatcagtattaaaa
gaagcattacttcaagcaaaagaaggtcgagttcatattttatctttaatgaatgaagct
gctaaagatatcgttccaagtgaagctttaccattagtagaacaatttgcaattgatcca
agtaaaataatggtaattattggaaaagcaggtgcaactataaaagaaataattgaaaaa
ttcactgtttcaattgatttagatagagatagtggaacagtaaaagttagtggaggaaat
aaacaaaatgttcttgatgcttgtgaacatataaaaacaatctcaaataatgctcctgca
agaaaagacgctccaaaaaatgttgattttgaaaaattatacgctgttgatgaagttgta
actggaaaagtagaaagagtagttgattttggtgcatttattcttttaccaaaaggtgga
gaaggtcttttacatatttcaaaaatttctaaagagagagtaaataatgtttcagatgtt
ttatctgttggtcaagaaatagaagtaaaagttttaaaagtaaaaaaagatagaatagaa
ttatcttcaaattaa
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