Arcobacter sp. L: ABLL_1727
Help
Entry
ABLL_1727 CDS
T01834
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
arc
Arcobacter sp. L
Pathway
arc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABLL_1727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arc03019
]
ABLL_1727
Enzymes [BR:
arc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABLL_1727
Messenger RNA biogenesis [BR:
arc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABLL_1727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
HI1480
Motif
Other DBs
NCBI-ProteinID:
BAK73602
LinkDB
All DBs
Position
1771831..1772730
Genome browser
AA seq
299 aa
AA seq
DB search
MEHLKNKTVDLSSVTTVVIDEVDTMLDMGFLEDIEKILPNVGPHRQIMMFSATMNQNVKK
LAKEFLTDPVVIEVASQRSSVKIIEQQIVLVDADKKAELLSYLIGSRNYSQVLVFVNMKK
EADDLVAHLELDGLPAECIHGDVRQSARAKALRKFKSGDIRVLVATDIAARGIDIELLPV
VVNFALPETIADYTHRIGRTGRAGNAGTAITLLSVKDYKFMIEIEKELIINIPRIEIEGF
ETTEKKPRLFKARPKQLSVKKAEAKKTAQKTGYTKTNTPKKVAKKKKTTKRDVNRSFRK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaacacttaaaaaataaaacagtagatttatcaagtgttacaacagttgtaattgat
gaagttgatactatgcttgacatgggatttttagaagatattgaaaaaattcttccaaat
gttggaccacatagacaaattatgatgtttagtgcaacaatgaatcaaaatgtaaaaaaa
cttgcaaaagaatttttaacagaccctgttgtaatagaagttgcaagtcaacgttcaagt
gtaaaaataatagaacaacaaatagttttagttgatgcagataaaaaagctgaactatta
tcatacttaattggatcaagaaactattctcaagttttagtttttgtaaatatgaaaaaa
gaagcagatgatttagtagcacatttagaacttgatggacttcctgctgagtgtattcat
ggagatgttagacaatcagcaagagcaaaagctctaagaaaattcaaatctggtgatatt
agagttttagtagcaactgatattgcagcacgtggaattgatatagaacttttacctgtt
gttgtaaactttgcattaccagaaacaatagctgattacacacataggattggaagaact
ggacgagctggaaatgctggaactgcaatcactcttttaagtgtaaaagattataagttt
atgattgaaattgaaaaagaattaatcataaatattccaagaattgagattgaaggtttt
gaaacaacagaaaaaaaaccaagactttttaaagcaagacctaaacaacttagcgttaaa
aaagcagaagctaaaaaaactgctcaaaaaacaggatatacaaaaacaaatactccaaaa
aaagtagcaaaaaagaaaaaaactacaaaaagagatgtaaatagaagtttccgaaaataa
DBGET
integrated database retrieval system
