Arcanobacterium buesumense: HC352_01725
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Entry
HC352_01725 CDS
T06546
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
arca
Arcanobacterium buesumense
Pathway
arca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC352_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arca03021
]
HC352_01725
03019 Messenger RNA biogenesis [BR:
arca03019
]
HC352_01725
Transcription machinery [BR:
arca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HC352_01725
Messenger RNA biogenesis [BR:
arca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HC352_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
ResIII
HeH
Motif
Other DBs
NCBI-ProteinID:
QJC21364
UniProt:
A0A6H2EJP0
LinkDB
All DBs
Position
389168..390946
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AA seq
592 aa
AA seq
DB search
MGRRGRNLVSETTTARKPALSTMRLPELKELAASMGIKMPPKSRKADYIAAIRSNNTEVK
NSRSGKSVQNADKTENESVSRTVQSDASNESVDTESKKIDIELPNEGGRNRNRRDRHNDR
RSAKAKMSDEEKAAALSALEEAAERRAEERGPVRDNDDEDNRHRRDRNQNNRRDRNQNNR
RDRNRNRRDRNQENNQESHNNDHASEQSAAEDVLIPVAGILDIDGNNAYLRTGGYLPGKS
DAYVSSQTIRRFGLRRGDAIQGSVRPHAENSRGRQHKYNPLVDVETINGLSIEDAALRPE
FNKLTPLYPQEMLRLETTQKALTTRIIDLVAPIGKGQRGLIVSPPKAGKTVVMQQIAMAI
ANNNPNVHLMVVLVDERPEEVTDMQRLVKGEVIASTFDRPASDHTIVAELAVERAKRLVE
LGQDVVILLDSLTRLSRAYNLAAPASGRILSGGVDAAALYPPKKFFGAARNIENGGSLTI
IASALVETGSKMDEVIFEEFKGTGNMELRLSRQLADRRIFPAVDINASGTRREEQLLSPE
ELKIMWHLRRGLGQMDVQEASDQLLGRMRKTESNSALLMSIVRGVQGAGIEE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgaggaaggaacctcgtgagcgaaacaacaactgctcgtaagcccgcacta
tctacaatgcggctcccagaacttaaagaattggctgcgtcgatgggaattaaaatgccc
cccaagtcacgcaaagctgattatattgcggcgattagaagcaataatactgaagtgaag
aattcccggtcgggaaagtcggtacagaatgctgataaaacagaaaatgaatcagtatcg
cgaaccgtccagtctgacgcgtcgaatgaatctgtagatacagaatcgaaaaagattgat
attgaattaccaaatgaaggcgggcgtaatcgtaaccgccgtgaccggcacaatgatcgt
cgctcagcaaaagctaaaatgagtgacgaagaaaaagccgctgcgcttagcgctttagaa
gaggctgctgaacgccgtgctgaggaacgtgggccggtacgagacaatgatgatgaagat
aatcgtcatcgtcgtgatcgcaaccaaaacaatcgtcgtgatcgcaaccaaaacaatcgt
cgtgatcgcaaccgtaatcgtcgtgatcgcaaccaagagaataatcaagaatctcataac
aacgatcacgcatctgagcaatcagcagctgaagatgttttgattccagttgcgggaatc
cttgatattgacggaaataatgcctacctgcgtactggcggctacttaccaggcaagagt
gacgcatacgtttcatcacaaacaattcgtcgttttggattacgccgtggcgatgcgatc
caaggatcagttcgtccgcacgcggaaaactctcgtggacgccaacacaaatataatcca
cttgttgatgtagagacgattaacgggctgagtatcgaagatgctgcgttgcgtccggag
ttcaacaagctcaccccgctttacccgcaagaaatgctacggttagaaactacacaaaag
gcactgaccacgcgaattattgatcttgtagccccaatcggtaagggacagcgaggctta
attgtctccccgccaaaggctggtaagaccgttgtgatgcagcaaatcgcgatggcgatt
gccaataacaacccaaacgttcatttaatggtggttctggttgatgagcgaccagaagaa
gtgaccgatatgcaacgtttagtaaagggcgaagttattgcatcaacctttgaccgccca
gcatctgatcatacaattgttgctgagcttgcagttgagcgtgctaagcgtttggtcgaa
ttgggacaagacgtcgttatcttgctagattcccttacccggttatcgcgagcttacaat
ctggccgccccagcatctggtcgaattttgtctggtggcgttgacgctgctgcattgtat
ccgccaaagaagttctttggcgctgctcgaaacattgaaaatggcggttcgttgacgatt
attgcctccgcgctcgtggaaactggatcgaagatggatgaagttattttcgaagagttc
aagggcactggcaatatggaattgcggttgtcacgtcagcttgcggaccgacgaatcttc
ccggcagtagatattaatgcatccggcactcgccgtgaagagcaactactttcgcctgaa
gagctcaagattatgtggcatttacgccgcggcttgggtcagatggatgtccaagaagcc
tcagatcaactactgggacggatgcgtaaaacagaatcgaattcagcattgctgatgtcg
attgttcgcggtgtccaaggtgcgggtatcgaagagtaa
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