Arcanobacterium buesumense: HC352_03620
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Entry
HC352_03620 CDS
T06546
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
arca
Arcanobacterium buesumense
Pathway
arca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
arca00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HC352_03620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arca03021
]
HC352_03620
Transcription machinery [BR:
arca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HC352_03620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARMET_C
HeH
Rho_N
SAP
Motif
Other DBs
NCBI-ProteinID:
QJC21682
UniProt:
A0A6H2ELC7
LinkDB
All DBs
Position
801459..802976
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AA seq
505 aa
AA seq
DB search
MAVSSRPSENLQKYLDTSELAKYRVPELKKIASDLGLSIPSKAVKATYIDQIAEYAADTL
KDSTAAANEETQQATKTNKSATKATSSKVSVKNADTKIASPADSSTLDGESESAEELDDD
LQTPDEPEALEEEDVDLEVEDLDVADEEVDDEDPDVTASSAEEIDEDEEQETVKETTAKR
SGAFIVRDSDDTDEPVQRVHVAGATADPVKDYLKQIGKVALLNAEEEVELAKRIEAGLFA
QHILDTTEIEDVRHRRELEIISRDGQKAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQE
GNLGLVRAVEKFDYAKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQ
RQMLQDLGREPTVEELAHELDMTEEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSE
AVVPADAVGFTLLQEQLHQVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERI
RQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtttcttcccgtccctctgaaaatctccaaaagtatttagatacatcggagctt
gctaagtatcgggtgcctgaactgaaaaaaattgcctcagatctgggcctgtccatacct
tcgaaagctgtcaaggcaacatacattgaccagatcgccgaatacgctgcagatacgtta
aaggacagcacggctgcggcaaatgaagagacacaacaggctactaaaacaaataagtca
gcaacaaaagctacttcctcaaaagtgtctgtgaaaaatgcggacacaaaaatagcttct
ccagctgattcatcaacacttgatggcgaatctgaaagtgctgaggaactcgatgatgat
cttcaaacaccagatgagcccgaagctctcgaagaagaagatgtggatctagaagtagaa
gatctcgatgttgctgatgaagaagttgacgacgaagatcctgacgtgaccgcttcaagc
gctgaagaaatcgacgaagacgaggaacaagaaactgttaaagaaacaacagcgaaacgt
tctggtgcattcattgttcgtgactctgatgatactgatgaacctgttcaacgagtccat
gttgctggcgcaaccgctgatcctgtcaaggattatctcaagcaaattggtaaagttgcg
ttgttaaacgccgaagaagaagttgaacttgctaagcgtattgaagctggcctttttgca
cagcatattctagataccaccgagatcgaggatgttcgccatcggcgggaacttgaaatt
atttccagagacggtcaaaaagcgaaaaaccatttattggaagcaaatttacgtctagtt
gtatccttggctaagcgttataccgggcggggcatgcttttcctcgatcttatccaagaa
ggaaaccttggtttagtgcgcgcagttgaaaaatttgactacgcaaagggatacaagttc
tcaacttatgcgacttggtggatccgtcaagcaattactcgcgcgatggctgatcaagct
cgaacaattcgtattccggttcacatggttgaagtcattaataagctcgcccgtgtacaa
cgccagatgcttcaagatcttgggcgcgaaccaactgtggaagaacttgcgcatgaactt
gatatgactgaagaaaaagtgattgaagttcaaaagtacggtcgtgaaccaatttcactt
cataccccgctcggtgaagatggggattctgaatttggtgatcttattgaggattcagaa
gcggttgtgcctgctgatgcagttggttttactcttttgcaagaacaacttcatcaagtt
cttgatacgttatctgaacgcgaagccggtgttgtgtcgatgcgtttcggccttactgat
ggccagccaaagacactggatgaaattggtaaagtctacggtgttacgcgtgaacgaatc
cgtcagattgaatcaaagacgatgtcgaagttacgccacccatcgcgttcccaagttctg
cgtgactacctcgactaa
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