Arcanobacterium buesumense: HC352_08775
Help
Entry
HC352_08775 CDS
T06546
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
arca
Arcanobacterium buesumense
Brite
KEGG Orthology (KO) [BR:
arca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arca03019
]
HC352_08775 (hrpB)
Enzymes [BR:
arca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HC352_08775 (hrpB)
Messenger RNA biogenesis [BR:
arca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HC352_08775 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_16
AAA_30
UvrD-helicase
AAA_11
HA2_N
nSTAND3
AAA_25
Cas3-like_C_2
NTPase_1
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
QJC22582
UniProt:
A0A6H2ENF5
LinkDB
All DBs
Position
complement(1898376..1900799)
Genome browser
AA seq
807 aa
AA seq
DB search
MNLTKILATDVGLPVASAIADIATSRGNVVIAAPPGSGKTTLVPVVLAHQLEKTGHPKVL
VVQPRRVAARAAARRIASLLGEPVGKQIGYRVRGETQPGRAIEMITPGVLLRMLHSDPEL
PGVGCVIIDEIHERDLDTDIACAFVLDVQSALRPDIRIIAMSATIALEQTAHLLNAEIIS
VPGDIHPVEIRDVPGPQALTSTAAGAIVVANEFVQHIARVVFQARSECDGSILVFVPGVR
DIDAVMGRLNGIDLPVMALHGQLSSVEQDRVLDASHDRIIVATALAESSLTVPGVRVVVD
SGLARQARVDGGIGGLVSVYASQASMIQRSGRAGREGPGVGYRCIAMARAPQYSPPEIRT
ADLTDALLQCAAWGAPNMAGLQLLDEPNPDNLAYAQRQLHGLGLIDDDGVITTRGRLVSQ
LPLGAHLARALIDASALVGSNKATDIVAFLSINMRMSHADIATGIRSKRTTNELTREIRR
LRSMLTQLIPDAPEQTGDWTWDDAVGVVVGLAHPYWVARARGQGYVLANGRGAQLPLGSS
LAGEEWLAIADTGQAQGRADAMIYAAAPIDADIVQDVARHLVTTETEIDAEKMRGYRVTR
LGAIEIARHPVTLTDADKVHVYAQRIQATGVAGLTWTPALRETRDRLAFLHQALGEPWPD
VSDTELNRTIGTWLIPFVTAREIDLAGALAALIPWEYAHQFDDLAPERIDTPLGSARVDY
AGERPRVRMRIQEAFGWQATPEICGVPVTLELLSPAQRPLAITDDLASFWAGPYAGVRAD
MRGRYPRHPWPEDPAHAEPTRRAKKRK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcttaccaagattctagcaaccgatgtggggctgccagttgccagcgcgattgca
gacattgccacttcgcgtggcaatgttgttattgccgcgcccccaggtagtggaaaaaca
acactcgttccagtagttctcgcccatcaattagaaaaaaccgggcatccaaaagtcctc
gttgtacaaccgcgccgagtggccgcccgggcagccgcacggcgaatagcctcccttctt
ggtgagccagttggcaaacagataggttatcgagttcgtggcgaaactcagcctgggcgt
gctattgaaatgatcacgcccggggtgctgctacgcatgctacacagtgacccggaactg
cccggcgtcggctgcgttatcatcgacgaaatccacgaacgcgacctcgacaccgatatc
gcctgtgcctttgttcttgatgtgcagtctgctttacgcccagacatacgtattattgcc
atgtctgccacgattgcattagaacaaacagcgcatttattgaatgcggaaattattagt
gttcccggggatattcatcctgttgagattcgagacgtcccagggccacaagcattaaca
tccactgctgccggggcaatcgtcgtagccaatgaatttgtgcaacacattgcccgggta
gttttccaagcacgtagcgaatgtgacggatcaattctcgtgtttgtccccggagtgcgt
gacatagatgcagtcatgggccggctaaacggaatagatcttccagttatggcccttcac
ggtcagttgagttctgtcgaacaagatcgcgtattggatgccagtcacgatcgaataatt
gttgctaccgccctcgcagaatcatcactaacagttccaggagttcgggtagttgttgat
agcgggttagcacgccaggctcgggtagatggtggaattgggggactggtgagcgtctat
gcctcccaagcctcgatgattcaacgctccgggcgtgccggacgagaaggccctggagtg
ggataccggtgtatagcgatggcacgggcaccgcaatattcaccgccagaaatccgtact
gctgacttaaccgatgcactcttacaatgcgccgcttggggtgcgccaaatatggccggt
ttacaacttcttgacgaacccaacccagataatcttgcctacgcccaacgccagttacat
ggcctaggattgatcgacgacgacggggtgatcactactcgtgggcgacttgtctcgcaa
ctccccctcggcgcacacttagctcgagcactgatagacgccagcgccctcgtcggctca
aataaggctacagacattgttgcgttcttatcgatcaatatgcgaatgtcacacgccgat
attgcaaccgggatccgaagcaaacgcacaaccaacgaactcaccagagaaatacgccgg
ttacgaagcatgctcacacagctcatcccggacgctcctgagcaaacaggtgactggacg
tgggacgatgcggtaggcgtcgtcgtcggcctagcacacccatattgggtggcacgcgct
cgcgggcaaggatacgtattagcaaacgggcgaggtgcacaactcccactcggctcttcg
ttagccggcgaagaatggttggcgatagccgatacgggacaagcacaaggccgagctgac
gccatgatctatgcagcggcgccgatcgatgcggatattgtgcaggatgtagcacgccac
ctcgttaccaccgaaaccgagattgacgcagagaaaatgcgcggatatcgcgtcactcgc
ctaggagccatcgagattgcccgccacccggtgaccttaacggacgcagacaaagtccac
gtgtatgcacaacgtattcaggcaaccggagtagccggcttgacgtggacgccagcactg
cgcgaaactcgcgaccgcctcgccttccttcatcaagccctcggcgaaccctggcccgat
gtttcggacactgaactcaaccgcactataggcacctggctgataccgtttgtgacagcg
cgtgaaatagatctagccggtgcgctcgcggcactcatcccgtgggaatatgcccatcaa
ttcgacgatcttgcacccgaacgcatcgacactccgctaggtagcgcgcgcgtggactac
gccggagaacgtccgcgagtgcgcatgcggatccaagaagcatttggttggcaggccacc
ccggagatttgtggtgtgccagttactctagaattgctctcgccagcccagcgcccgctc
gccatcaccgacgacctcgcctcattctgggccggaccgtatgcgggcgtgcgcgccgat
atgcgcgggcgatacccgcgtcacccctggccagaagacccggctcatgccgaacccaca
agacgggcgaagaagcggaaatga
DBGET
integrated database retrieval system
