Arcobacter sp. 15-2: ALC152_14330
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Entry
ALC152_14330 CDS
T11675
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
arco Arcobacter sp. 15-2
Pathway
arco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALC152_14330 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arco03021
]
ALC152_14330 (rho)
03019 Messenger RNA biogenesis [BR:
arco03019
]
ALC152_14330 (rho)
Transcription machinery [BR:
arco03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ALC152_14330 (rho)
Messenger RNA biogenesis [BR:
arco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ALC152_14330 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
ATPase_2
DUF5010
S1CSD-TOTE-2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BFU78218
LinkDB
All DBs
Position
1390953..1392332
Genome browser
AA seq
459 aa
AA seq
DB search
MEETQQAEINTSDTPNPQKKNTKKTSNQNSNNKKSRTHVPVKGLTIDQLRGKNTLELIEA
GKEVNIENPQELQRQDLIFAILEAQTVAGGYILFTGILDIKEAGFGFLRPFDGKFSDSYS
DSYVSATQIKRFALRSGDIVSGQVRPPSKESEKYYALLKIEAINYLPVNESKNRPLFDNL
TPLYSTEKFQFEYDPNRLTGRIIDMFAPMGKGQRGLIVAQPKSGKTELLKEIAHGISKNN
PESTLMVLLIDERPEEVTDMQRSVNGEVYSSTFDLPAANHIKVAEMVINKAKREVEMGKD
VVILLDSITRLARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIIATT
LVETGSKMDEVIFEEFKGTGNSEVVLSRKAAERRVFPAMNIVKSGTRKEELLLHPEELQK
IWILRNAMAEMDEVESLKFLYKKMKETKTNAEFLISMNG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacacagcaagcagaaataaatacttctgatactccaaaccctcaaaagaaa
aacactaaaaagacatcaaatcaaaattcaaataacaaaaaatcaagaacacatgtccct
gtaaaaggacttaccattgatcagttaagaggaaaaaatactcttgaacttattgaagca
ggaaaagaagtaaatattgagaaccctcaagaacttcaaagacaagatcttatttttgct
atattagaagcacaaactgtagctggtggctatattctttttacaggaattttagatatc
aaagaagcaggttttggatttttaagaccatttgatggaaaatttagtgattcttacagt
gatagttatgtaagtgctactcaaattaaacgatttgcactaagaagtggagatattgtt
tcagggcaagtaagacctccatctaaagagagtgaaaaatattatgctcttttaaaaatc
gaagctatcaattatttgccagtaaatgaatcaaaaaatagaccactttttgataacctt
acaccattatactcaacagaaaagtttcaatttgaatatgatccaaatagattaacaggt
cgtatcatagatatgtttgcccctatgggtaaaggtcaaagaggactaattgtagctcaa
ccaaagtctggtaaaacagaactattaaaagagatagctcatggaataagtaaaaataat
ccagaatcaacactaatggttcttttaattgatgaacgacctgaagaggttacagatatg
caaagaagtgtaaatggtgaagtgtatagttcaacatttgatttaccagcagcaaatcat
attaaagttgctgagatggttataaataaagcaaaaagagaagttgaaatgggtaaagat
gttgttattttacttgattcaatcacaagacttgctcgtgcatataatacagtgacacct
agttcaggtaaagtactttctggtggagttgatgctaatgcactacataaaccaaaacga
ttttttggagctgctagaaacattgaagagggtggtagtttaactatcattgctacaaca
cttgttgaaactggttcaaaaatggatgaagttatttttgaagagtttaaaggtactgga
aatagtgaagttgtattgagtagaaaagcagcagaaagaagagttttccctgctatgaat
attgtaaaatcaggaactagaaaagaggaactgttattacacccagaagagttacagaaa
atttggatacttagaaatgccatggcagagatggatgaagtagaatcattaaaattttta
tataaaaaaatgaaagagactaaaacaaatgctgagtttttgatctctatgaacggttag
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