Actinomyces radicidentis: AXF14_01080
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Entry
AXF14_01080 CDS
T04288
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ard
Actinomyces radicidentis
Pathway
ard03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF14_01080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ard03021
]
AXF14_01080
03019 Messenger RNA biogenesis [BR:
ard03019
]
AXF14_01080
Transcription machinery [BR:
ard03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXF14_01080
Messenger RNA biogenesis [BR:
ard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF14_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
SAP
VAD1-2
Motif
Other DBs
NCBI-ProteinID:
AMD86449
UniProt:
A0A120KMB0
LinkDB
All DBs
Position
complement(250810..252906)
Genome browser
AA seq
698 aa
AA seq
DB search
MTETPSDKPALSTMRLAELQQLASSMGLKGTSRMRKSELVAAIRGEGSDAARSSARSSSS
EAPAQQDAAATAAERSADQQEAPRSRRRRATAQAGAPEHHDAERADAAPREERQEGSAES
HDDAAREERSSRRSRRERGERGQDAQRNQDSDGQREGSRRGRRRAEAESGEAATRRYDRD
DQAPDSPEDHLDAKAALMRDLADATGTAAVEPSERKRRDRDRDRNHGNGNNGNDDRSNRD
SETDSWADEGRGGRRRRGRKRRDRDRDRNNNGNGSNGNDQNDSGQGRGNRDDDVLLPVAG
ILDVADKQHAYLRTSGYLPGAKDVYVNAQQMKDAGLRPGDAITGWVREGGETANPGGNQG
GRSGRRQNRQNRQKYNPLVSIETVNGMDPERSKRRPEFTKLTPLYPQEQLRLETTPKALT
PRVIDLVAPIGKGQRGLIVSPPKAGKTIVLQQIANAISVNNPEAHLMVVLVDERPEEVTD
MQRTVKGEVIASTFDRPASDHTTVAELAIERAKRLVELGQDVVVLLDSITRLGRAYNLAA
PASGRILSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGT
GNMELRLSRQLAEKRIFPAVDVAASSTRREELLINPAQLKIMWRLRRLFAGLDQQAALEL
VIGKLKETQSNAEFLMTISRTTPEGTSLADADDGANLA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacccccagcgacaagcccgcgctgtccaccatgcgtctggccgagctgcag
cagctcgcctcctccatgggcctcaagggcacctcccggatgcgcaagagcgagctcgtc
gccgccatccgcggcgagggctccgacgccgcgcgctcctcagcccgctcctcctcgtcc
gaggcccccgcccagcaggacgcggcggccaccgcggcggagcgctccgccgaccagcag
gaggccccccgctctcgccgtcgccgcgccacggcccaggccggcgccccggagcaccac
gacgccgagcgcgccgacgccgccccccgcgaggagcggcaggaggggagcgccgagtcc
cacgacgacgccgcccgtgaggagcgctcctcgcgccgcagccgtcgtgagcgcggcgag
cgcggccaggacgcccagcgcaaccaggactccgacggccagcgcgagggctcgcgacgc
ggccgtcgtcgcgccgaggccgagtccggagaagccgccacccggcgctacgaccgcgac
gaccaggcccccgactcgcccgaggaccacctcgacgccaaggccgccctcatgcgcgac
ctcgccgacgccaccggcaccgccgccgtcgagccctccgagcgcaagcgccgcgaccgg
gaccgggaccgcaaccacggcaacggcaacaacggcaacgacgaccgctccaaccgcgac
tccgagaccgactcctgggccgacgagggccgaggcggccgccgccgtcgtgggcgcaag
cgccgcgaccgggaccgcgaccgcaacaacaacggcaacggcagcaacggcaacgaccag
aacgactccggccagggccgcggcaaccgggacgacgacgtcctcctgcccgtcgccggc
atcctcgacgtcgccgacaagcagcacgcctacctgcgcacctccggctacctgcccggt
gccaaggatgtctacgtcaacgcccagcagatgaaggacgcgggcctgcgtcccggcgac
gccatcaccggctgggtccgcgagggtggcgagaccgccaaccccggcggcaaccagggc
ggccgctccggccgtcgccagaaccggcagaaccgccagaagtacaaccccctcgtctcc
atcgagaccgtcaacggcatggacccggagcgctccaagcgccgcccggagttcaccaag
ctcacaccgctctacccgcaggagcagctgcgcctcgagacgacgcccaaggccctcacg
ccccgcgtcatcgacctcgtcgcccccatcggcaagggccagcgcggcctcatcgtctcg
ccgccgaaggccggcaagacgatcgtgctgcagcagatcgccaacgccatcagcgtcaac
aaccccgaggcccacctcatggtcgtgctcgtcgacgagcgccccgaggaggtcacggac
atgcagcgcacggtcaagggcgaggtcatcgcctcgaccttcgaccgccccgcctcggac
cacacgacggtcgctgagctcgccatcgagcgcgccaagcgcctcgtcgagctcgggcag
gacgtcgtcgtgctcctcgactccatcacccgcctcgggcgcgcctacaacctcgccgcc
ccggcatccggccgcatcctctccggtggtgtcgacgccagcgccctctacccgccgaag
cgcttcttcggcgccgcccgcaacatcgagaacggcggctccctcacgatcctcgccacc
gccctggtggagaccggctccaagatggacgaggtcatcttcgaggagttcaagggcacc
ggaaacatggagttgcgcctgtcgcgccagctcgccgagaagcgcatcttcccggccgtc
gacgtcgcggcctcctccacgcgccgcgaggagctcctcatcaacccggcccagctcaag
atcatgtggcgcctgcgccgcctcttcgccgggctggaccagcaggccgccctcgagctc
gtcatcggcaagctcaaggagactcagtcgaacgccgagttcctcatgacgatctcgcgc
accacgccggagggcacctccctggccgacgccgacgacggcgccaacctcgcctga
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