KEGG   Actinomyces radicidentis: AXF14_03180
Entry
AXF14_03180       CDS       T04288                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
ard  Actinomyces radicidentis
Pathway
ard03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ard00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AXF14_03180
  09124 Replication and repair
   03420 Nucleotide excision repair
    AXF14_03180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ard03021]
    AXF14_03180
   03400 DNA repair and recombination proteins [BR:ard03400]
    AXF14_03180
Enzymes [BR:ard01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AXF14_03180
Transcription machinery [BR:ard03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AXF14_03180
DNA repair and recombination proteins [BR:ard03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AXF14_03180
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22
Other DBs
NCBI-ProteinID: AMD86784
UniProt: A0A0X8JDB0
LinkDB
Position
746170..747885
AA seq 571 aa
MSPSPAVPDGPLIVQSDKTVLLEVAHADAADARRAIAPFAELERAPEHIHTYRITPLALW
NARAAGLDAETVIHVLITYSRFPVPHSLLTEIAETMGRYGRLQLVTVPAHGLVLHATDVP
VLEEVMRSKRTKGLLGERLSPEDVVVHPSERGNLKQVLIKLGWPAEDLAGYVDGEKHPIV
LQDSPEGVAAGEPGAFALRPYQEQAVDAFWAGGSGVVVLPCGAGKTLVGAAAMARSSTTT
LILVTNAVSARQWKEELIRFTSLTEDEIGEYSGSRKEVRPVTIATYQVLTMKRKGVYPHL
DLLDAHDWGLIVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKR
YDAPWKDLENQGWIAPAVCTEVRLTLDAGERMTYATAESEDRYRLAATTPRKVAVVDAVL
ARHRGESALVIGQYVDQLEELAEHLGAPVITGATTVRERQKLYDAFRAGEVDTLVVSKVA
NFSIDLPGASVAVQVSGSFGSRQEEAQRLGRIVRPKEDGRQAHFYTVVTRDTVDQEFAAH
RQRFLAEQGYAYDVVDAEDLAGDGEDSPAGA
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgtccccctcccccgcggtccccgacggcccgctcatcgtccagagcgacaagacggtc
ctgctcgaggtggcccacgccgacgccgccgacgcgcgccgcgccatcgcgcccttcgct
gagctcgagcgcgccccggagcacatccacacctaccggatcacgccgctggcgctgtgg
aacgcccgcgccgccggcctcgacgccgagaccgtcatccacgtcctcatcacctactcg
cgcttcccggtgccgcactcgctgctcaccgagatcgccgagaccatgggccgctacggg
cgtctccagctcgtcaccgtccccgcccacggcctcgtcctccacgccaccgacgtcccc
gtgctcgaggaggtcatgcgctccaagcgcaccaagggcctgctcggtgagcgcctctcc
ccggaggacgtcgtcgtccacccctccgagcgcggcaacctcaagcaggtcctcatcaag
ctcggctggcccgcggaggacctcgccgggtacgtcgacggcgagaagcaccccatcgtg
ctccaggactcccccgagggcgtcgccgcgggtgagcccggcgccttcgcgctgcgcccc
taccaggagcaggccgtggacgcgttctgggccggcggctccggcgtcgtcgtcctgccc
tgcggggccgggaagaccctcgtcggcgcggccgccatggcgaggagctcgaccacgacg
ctcatcctcgtcaccaacgccgtctccgcacgccagtggaaggaggagctcatccgcttc
acctccctgacggaggacgagatcggcgagtactcgggctcccgcaaggaggtccggccc
gtcaccatcgcgacgtaccaggtgctcaccatgaagcggaagggcgtctacccgcacctc
gacctgctcgacgcccacgactggggcctcatcgtctacgacgaggtccacctcctgccc
gccccgatcttccgcatgacggcggacctgcaggcgcgtcgccggctcgggctcaccgcc
accctggtgcgcgaggacgggcgcgaggacgaggtcttctcgctcatcggtcccaagcgc
tacgacgccccgtggaaggacctggagaaccagggctggatcgcgcccgcggtgtgcacg
gaggtgcggctgacgctggacgccggggagcgcatgacctacgcgaccgcggagtccgag
gaccgctaccgcctcgccgcgaccacgcctcgcaaggtcgcggtggtggacgccgtgctg
gcgcggcaccggggcgagtccgcgctcgtcatcgggcagtacgtggaccagctcgaggag
ctcgccgagcacctcggcgcgcccgtcatcaccggtgcgacgaccgtccgcgagcgccag
aagctctacgacgccttccgcgccggggaggtggacacgctcgtcgtctccaaggtcgcg
aacttctccatcgacctgccgggggcgagcgtcgccgtgcaggtgagcgggtccttcggg
tcccggcaggaggaggctcagcgcctcgggcggatcgtgcgccccaaggaggacggccgc
caggcgcacttctacacggtggtcacgcgggacacggtggaccaggagttcgcggcgcac
cggcagcgcttcctggcggagcagggctacgcctacgacgtcgtcgacgccgaggacctc
gccggggacggggaggactcgcccgccggggcctga

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