Actinomyces radicidentis: AXF14_07150
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Entry
AXF14_07150 CDS
T04288
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ard
Actinomyces radicidentis
Pathway
ard03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXF14_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ard03021
]
AXF14_07150
03400 DNA repair and recombination proteins [BR:
ard03400
]
AXF14_07150
Enzymes [BR:
ard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXF14_07150
Transcription machinery [BR:
ard03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXF14_07150
DNA repair and recombination proteins [BR:
ard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXF14_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AMD87397
UniProt:
A0A0X8JEJ2
LinkDB
All DBs
Position
1698783..1702742
Genome browser
AA seq
1319 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIKSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRHDDLPSLRAELEVKKQHVEEAGEADVEARQKRLEED
LAQLEAEGAEQVQRDKVRKTAEREMGALRRKNTRTLEHMDKVWDRFVSLKVGDLEGDEVL
YRDMVADYGIYFKGAMGAEAIQSRLRTFDLDAEAESLSEIVANGTGQRKTRAIKRLKVIN
AFRITGTAPEAMVLDNIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPTIIVNNEKRMLQDAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPSVMALELFKPFVMKRLVELKEAQNVKAAKRMVERQN
PKVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAMQLHPLVCGAFNADFDGDQ
MAIHLPLGAEAQAEARVLMLSSNNILKPSDGRPVTMPSQDMIIGTYYLTNTPDPAVEVDE
DAEGNAVVPAFSSFAEAIMAHDFGFLDMNATADIRFEEGVTPPEDWEAPEDYEEGDPITL
RTSLGRAIFNTGLPESFPYVNDVVDKKRLGNIINTLAESYPRVDVAASLDALKSNGFHWS
TWSGITVAFADVVSPASKPEILARYEAEAAEIEEQFELGALTEEDRYSSLIDIWTKATNE
VADAMRENFPERNTVFQMVSSGGRGNWDQIRQLAGMRGLVADPKQRLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTRKGLTKRIFSW
KEIDGERVKEPSEILGTTVYGTTLARDAVDAEGNVVIEAGTDLGDAEIQAAIGAGIEEVT
CRSVLTCDSQVGTCAACYGRSLASGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAA
GAADITQGLPRVQELFEARTPKGEAAVAEAAGTVKIEDDAEGKRLVVTRDDGEEDLVVPV
SRRQRLLVTDGDHVEPGDALTEGPIDPKKVLRLRSVGATQRHLVDEVQEVYRSQGVDIHS
KHIEVIVRQMLRRVTILEAGDTNLLQGDLVDVMNFRAENRRVMAEGGKPASARTELMGIT
KASLATDSWLSAASFQETTRVLTEAAMNGKSDPLLGLKENVILGKLIPAGTGLSRYSDIE
VEPTEEVKQEVFSRTGYNDDVFGVGDSVALDDFSFGGDFRADFSDDFRTGFHGGEDYQF
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgccaacgtcttcgacaggatccagctcggcctcgccaccgctgaggacatc
aagtcctggtcccacggtgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
ccggagaaggacggactcttctgcgagaagatcttcggccccacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcgtctgcgagcgctgcggcgtc
gaggtgacccgctccaaggtccgccgcgagcgcatggcccacatcaagctggccgccccc
gtcacccacatctggtacttcaagggcgtcccctcgcgcctgggctacctgctcaacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtcaccgaggtcgac
gaggagggccgtcacgacgacctcccgtccctccgcgccgagctcgaggtcaagaagcag
cacgtcgaggaggccggcgaggccgacgtcgaggcccgccagaagcgcctcgaggaggac
ctcgcccagctcgaggccgagggcgccgagcaggtccagcgcgacaaggtccgcaagacc
gccgagcgcgagatgggcgccctgcgccgcaagaacacccgcaccctcgagcacatggac
aaggtgtgggaccgcttcgtgtccctcaaggtcggagacctcgagggcgacgaggtcctg
taccgcgacatggtcgcggactacggcatctacttcaagggcgccatgggtgcggaggcc
atccagtcccgcctgcgcaccttcgacctggacgccgaggccgagtccctctccgagatc
gtcgccaacggcaccggccagcgcaagacccgcgccatcaagcgcctcaaggtcatcaac
gccttccgcatcaccggcaccgcccccgaggcgatggtcctggacaacatcccggtcatc
ccgccggacctgcgccccatggtccagctggacggcggccgcttcgcgacctccgacctc
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctcatggacctc
ggcgccccgacgatcatcgtcaacaacgagaagcgcatgctccaggacgccgtcgacgcc
ctgttcgacaacggccgccgcggccgcccggtcacgggcgtcggcaaccgcccgctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgtgtcgactactcgggccgctcggtcatcgtcgtcggcccccagctcaagctgcaccag
tgcggactgccgagcgtcatggccctcgagctcttcaagcccttcgtcatgaagcgcctc
gtcgagctcaaggaggcccagaacgtcaaggccgccaagcgcatggtcgagcgccagaac
cccaaggtgtgggacgtcctggccgaggtcatccgcgagcacccggtgctcctcaaccgc
gcccccacgctgcaccgcctgggcatccaggccttcgagccgcagctcatcgagggcaag
gccatgcagctccacccgctcgtgtgcggcgccttcaacgccgacttcgacggcgaccag
atggcgatccacctgccgctgggcgccgaggcgcaggccgaggcccgcgtcctcatgctc
tcgagcaacaacatcctcaagccgtccgacggccgcccggtcaccatgccctcgcaggac
atgatcatcggcacctactacctcacgaacacgccggacccggccgtcgaggtggacgag
gacgccgagggcaacgcggtcgtcccggccttctcctccttcgcggaggcgatcatggcc
cacgacttcggcttcctcgacatgaacgccacggcggacatccgcttcgaggagggcgtc
acgccccccgaggactgggaggcccccgaggactacgaggagggcgacccgatcaccctg
cgcacgagcctgggccgcgccatcttcaacaccgggctcccggagtccttcccgtacgtc
aacgacgtcgtggacaagaagcggctggggaacatcatcaacaccctggccgagtcctac
ccgcgcgtggacgtcgccgcctcgctggacgccctcaagtccaacggcttccactggtcc
acctggtccggcatcaccgtcgccttcgcggacgtcgtctccccggcctccaagccggag
atcctcgcccgctacgaggccgaggccgccgagatcgaggagcagttcgagctcggcgcc
ctcaccgaggaggaccgctactcctccctcatcgacatctggacgaaggccaccaacgag
gtcgccgacgccatgcgcgagaacttcccggagcgcaacaccgtcttccagatggtctcc
tccggcggtcgaggcaactgggaccagatccgtcagctcgccggcatgcgcggcctcgtg
gccgaccctaagcagcgcctcatcgagcgcccgatcaagtcgaactaccgcgagggcctg
tccgtcctcgagtacttcatcgcgacccacggcgcccgcaagggcctcgcggacaccgcg
ctgcgcacggccgactccggctacctgacccgtcgtctcgtcgacgtctcccaggacgtc
atcgtccgcgaggacgactgcggcacccgcaagggcctcaccaagcggatcttctcctgg
aaggagatcgacggcgagcgtgtcaaggagcccagcgagatccttggcaccaccgtctac
ggcaccacgctcgcgcgcgacgccgtcgacgccgagggcaacgtcgtcatcgaggccggc
accgacctcggcgacgccgagatccaggccgccatcggggccgggatcgaggaggtcacc
tgccgctcggtcctcacctgcgactcccaggtcggcacctgcgccgcctgctacggccgc
tcgctggcctccggcaagcgcgtcgacatcggtgaggccgtcggcatcatcgcggcccag
tccatcggcgagcccggcacgcagctcaccatgcgcaccttccacaccggtggtgcggcc
ggcgccgccgacatcacgcagggccttccccgcgtgcaggagctcttcgaggcccgcacc
ccgaagggcgaggccgccgtggccgaggccgccggcaccgtcaagatcgaggacgacgcc
gagggcaagcgcctcgtcgtcacccgcgacgacggcgaggaggacctcgtggtccccgtc
tcgcgccgccagcgcctgctggtcaccgacggcgaccacgtggagccgggcgacgccctc
accgagggcccgatcgaccccaagaaggtcctgcgcctgcgcagcgtcggcgccacccag
cgccacctcgtcgacgaggtccaggaggtctaccgctcccagggcgtggacattcactcc
aagcacatcgaggtcatcgtgcgccagatgctgcgccgcgtgactatcctcgaggcgggg
gacacgaacctcctccagggcgacctggtggacgtcatgaactttcgcgccgagaaccgc
cgcgtcatggccgagggcggcaagcccgcctcagcccgtacggagctcatgggcatcacg
aaggcctcgctggccacggactcctggctgtccgccgcctccttccaggagacgacgcgc
gtcctcaccgaggccgccatgaacggcaagtccgacccgctcctggggctcaaggagaac
gtcatcctcggaaagctcatcccggccggcacgggcctgtcgcgctactcggacatcgag
gtcgagcccaccgaggaggtcaagcaggaggtcttctcccgcaccggctacaacgacgac
gtcttcggcgtcggcgactcggtcgccctggacgacttctccttcggcggcgacttccgc
gcggacttctccgacgacttccgcaccggcttccacggcggcgaggactaccagttctga
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