Actinomyces radicidentis: AXF14_08210
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Entry
AXF14_08210 CDS
T04288
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ard
Actinomyces radicidentis
Pathway
ard03420
Nucleotide excision repair
ard03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXF14_08210
03430 Mismatch repair
AXF14_08210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ard03400
]
AXF14_08210
Enzymes [BR:
ard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXF14_08210
DNA repair and recombination proteins [BR:
ard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXF14_08210
MMR (mismatch excision repair)
Other MMR factors
AXF14_08210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMD88513
UniProt:
A0A0X8JHK0
LinkDB
All DBs
Position
1917328..1920624
Genome browser
AA seq
1098 aa
AA seq
DB search
MHEPTEEQARVIAHPLTPLLVVAGAGSGKTATMSQRVVHLVATGRARADGVLGLTFTRKA
TAELAQRVGARLDQLAASGLIEADEDAPEPTIATYNSFAGSLVRDHGLRIGVDPDSTLIT
EARAWQIASDLVESRSEPLPIESLSTATEAVLRLDGALSENLLTVEQAAEQIEQLQELFT
GLAGIRGLKTAFGKPAGTMGEQLGMLEVVAAFRERKRARSLLTFGDQIALACRIAEDVPE
VARAVRRQYPAVLLDEFQDTSVAQVRLLSALFEGSGVTAVGDPNQAIYGWRGASAGALDS
FHEAFNPAGTEAVRAGADPDEATPVLPLSTAWRNDVAVLDAANVLSTPLRVHSVQPGDAL
VSHLPVEPLRPRPATAGLAQGAVLGAFLQDSLAEAEAVAEFMGERWGADVSLAVLSRTHA
ALEPAAEALGARGIPYEVVGIGGLLTLPEVADVRALLTVAADPERGDRLMRLLTGAGIGA
TDLRALHQYARVQARGPVREEAPEGEENPDAPLLSEAIEAIARRADSGRDGVDAVTVPGL
TPAGTRLADRLARRVRRVRSALALPLPDLVVLAEQALGLDVEIAARVDAPLGRRGLDAFR
GVAEQYAADIDAPTLAGFLEWLAVAEVREGALGVPEVEPEPGAVQLLTVHAAKGLEWDSV
AVVGLNEGGFPNYDASPKEDLSVADRSWMTKKAEFPHPLRADAGTLPPFELGALEPPAVD
KDDAKDLLEQYSQALGRYGVAEERRLAYVAVTRARHDVLLTGSHFSKTSSRTRPMSRFLA
ELVRRDLVAPYGAGFTELAEDAENPMAAATTTARWPVEPEDAADAGPEGAERRARLAAAE
AVRGLVASGGTVEVTGAAGAGGDSASTDAAASRWRQEAALLLAERARRDSEPPSVRLPQH
LAATSLDELRSDPAAFALDLRRPLPPHPREAGRLGTVFHDAVAQRLAAGSALLSLTDAGV
PDTVTPEDRAKLERWLATAEELPLLDGYTLAATETDRELTLGATTLRCRIDAVFHRDGAA
DDEPGAWLIVDWKTGRWHVPVDQLSIYVHAWSASLGVPAEAVRAAYVYVDAPGGEVDELA
SGDVLPLAAIEEILSPRG
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atccatgagcccaccgaggagcaggcccgcgtcatcgcccacccgctcacgcccctcctc
gtggtcgcgggcgccggctccggcaagaccgccacgatgagccagcgcgtcgtccacctc
gtcgccacgggccgcgcccgcgccgacggcgtcctcggcctcaccttcacccgcaaggcc
accgccgagctcgcccagcgcgtcggcgcccgcctcgaccagctcgcggcctccggcctc
atcgaggccgacgaggacgcccccgagccgaccatcgccacctacaactccttcgccggc
tccctcgtgcgggaccacggcctgcgcatcggcgtcgaccccgactccaccctcatcacc
gaggcccgcgcctggcagatcgcctctgacctcgtcgagtcccgctccgagccgctcccg
atcgagtccctgtccacggccaccgaggccgtgctccgcctcgacggcgccctctccgag
aacctcctcaccgtcgaacaggctgccgagcagatcgagcagctccaggagctcttcacc
ggcctcgccgggatccgcggcctcaagaccgccttcggcaagccggcgggcacgatgggc
gagcagctcggcatgctcgaggtcgtcgccgccttccgggagcgcaagcgcgcccggtcc
ctcctcaccttcggggaccagatcgcgctggcctgccggatcgccgaggacgtccccgag
gtcgcccgcgccgtgcgccgccagtacccggccgtgctcctcgacgagttccaggacacc
tccgtcgcccaggtccggctcctctccgccctcttcgagggcagcggcgtcaccgccgtc
ggcgaccccaaccaggccatctacggctggcgcggagcctccgccggggcgctcgactcc
ttccacgaggccttcaacccggccggcaccgaggcggtcagggcgggcgcggacccggac
gaggccacccccgtcctgcccctgtcgaccgcctggcgcaacgacgtcgccgtcctcgac
gccgccaacgtcctctccacgccgctgcgcgtccactccgtccagcccggcgacgccctc
gtctcccacctccccgtcgagccgctgcggccccgtccggccaccgccgggctggcgcag
ggggcggtcctcggggctttcctccaggactcgctcgcggaggcggaggcggtcgcggag
ttcatgggcgagcgctggggcgctgacgtctccctcgccgtcctgtcccgcacgcacgcc
gccctcgagcccgcggcagaggccctcggggcgcgcggcatcccctacgaggtcgtcggc
atcggcggactcctcaccctgcccgaggtcgccgacgtccgcgcgctcctcaccgtcgcc
gccgaccccgagcgcggcgaccggctcatgcgcctgctcaccggcgccggcatcggcgcc
accgacctgcgcgccctgcaccagtacgcccgtgtccaggcccgtggcccggtccgcgag
gaggcgcccgagggggaggagaacccggacgccccgctgctctccgaggcgatcgaggcg
atcgcccgccgcgccgactccggccgcgacggcgtcgacgccgtcacggtccccgggctg
acacccgccgggacgcggctcgccgaccggttggcccggcgggtgcgacgcgtccgctcc
gcgctcgccctgcccctgccggacctcgtcgtcctcgccgagcaggccctcggactcgac
gtcgagatcgccgcccgcgtcgacgcgccgctcggacgtcggggcctggacgcgttccgg
ggcgtcgccgagcagtacgccgccgacatcgacgccccgaccctcgccggcttcctcgag
tggctcgccgtcgccgaggtgcgcgagggggcgctcggcgtccccgaggtcgagcccgag
cccggcgccgtccagctcctcacggtccacgccgccaagggcctcgagtgggactccgtg
gccgtcgtcggcctcaacgagggcgggttccccaactacgacgcgagccccaaggaggac
ctgtccgtcgcggaccgctcctggatgacgaagaaggccgagttcccccacccgctgcgg
gccgacgccggcaccttgccgcccttcgagctcggggcgctcgagccgccggcggtcgac
aaggacgacgcgaaggacctcctcgagcagtactcccaggctctcgggcgctacggcgtg
gcggaggagcggcgcctggcctacgtggcggtgacccgcgccaggcacgacgtgctcctc
accggctcgcacttctcgaagacctcgagccgtacccggcccatgagccgcttcctcgcc
gaactcgtccgccgcgacctcgtcgcgccctacggcgccggcttcaccgagctcgccgag
gacgccgagaaccccatggccgcggcgacgacgacggcgcgatggcccgtcgagccggag
gacgccgccgacgccggtcccgagggcgccgagcggcgagcgcgtctggccgccgccgag
gcggtccggggactggtggcgagcggcgggaccgtcgaggtcaccggagcggcaggggcg
ggcggtgactccgcgtccacggacgcggccgcgtcgcgctggcgacaggaggcggcgctc
ctcctcgccgagcgcgcccgacgtgacagcgagccgccctcggtccgtctgccccagcac
ctcgcggcgacgagcctcgacgagcttcgttcggacccggctgccttcgccctcgatctg
cgccgcccgctgccgccgcacccgcgcgaggccgggcgcctcggcaccgtcttccacgac
gccgtcgcccagcggctcgccgcgggctccgcgctgctcagcctcaccgacgccggtgtc
ccggacaccgtcacgccggaggaccgcgccaagctggagcgctggctcgccaccgcggag
gagctgccgctgctcgacggctacacgctggccgccacggagacggaccgagagctcacg
ctcggcgcgacgaccctgcgctgccgcatcgacgccgtcttccacagggacggcgccgcc
gacgacgagccgggcgcctggctcatcgtggactggaagaccgggcggtggcacgtgccc
gtcgatcagctgagcatctacgtgcacgcctggtcggcgtcgctcggcgtgcccgcggag
gcggtgcgtgcggcatacgtctacgtcgacgcccccggcggggaggtcgacgagctcgcg
agcggggacgtcctgcccctggccgcgatcgaggagatcctcagcccgcgtggctga
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