Actinomyces radicidentis: AXF14_08920
Help
Entry
AXF14_08920 CDS
T04288
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ard
Actinomyces radicidentis
Pathway
ard03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF14_08920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ard03019
]
AXF14_08920
03016 Transfer RNA biogenesis [BR:
ard03016
]
AXF14_08920
Enzymes [BR:
ard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXF14_08920
Messenger RNA biogenesis [BR:
ard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF14_08920
Transfer RNA biogenesis [BR:
ard03016
]
Prokaryotic type
tRNA degradation factors
AXF14_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AMD87682
UniProt:
A0A0X8JF39
LinkDB
All DBs
Position
2078931..2081309
Genome browser
AA seq
792 aa
AA seq
DB search
MFLDDPEVTAAEAVIDNGSFGKRVVRFETGRLAKQAAGSAMAYLDGETAILSATTVGKHP
KDQFDFFPLTVDVEERQYAAGRIPGSFFRREGRAGTSAILACRLIDRPLRPSFVKGLRNE
VQVVETVLAIHPDDAYDVLAINAASMSTQIAGLPFAGPVAGTRLALIDGQWVAFPRWSEL
ERATFNMVVAGRVLEDGDVAIMMVEAGATENAWDLIQAGATAPTETVVASALEAAKPHIK
ALCEAQMEVAKHASKPTAEFPLYLDYTDEQYDAVEKAAEQFDLAGAIATEGKQARDIATD
AVRDQVIGSLAERFGGEDDIKALKAAFKSVTKKLVRHRTLTEGIRMDGRGLKDIRTLAAE
VEVLPRVHGSAIFERGETQILGVTTLNMLRMEQQIDDLSPITRKRYMHQYVFPPFSTGET
GRVGAPKRREVGHGALAERALVPVLPSKDDFPYAIRQVSEALGSNGSTSMGSVCASTLSM
LNAGVPLKAPVAGIAMGLMHEEIDGETKWATLTDILGSEDAFGDMDFKVAGTRDFITALQ
LDTKLDGLPSEILAGALGQARDARFKLLDLIDAAIDGPDEMAPTAPRVLTVHIPVDKIGE
VIGPKGKMINQIQEDTGADLTVEDDGTVYIGASDGPSAEAARDAVNAIANPQMPEIGERF
VGTVVKTTTFGAFVSLTPGKDGLLHISQIRRLVGGKRVENVEDVLGVGDKVNVELAEIDQ
RGKLSLHAVLNEEQQAAEDEARAHRSERGDDEGERRERRPRRRSGEGEDGERRERRPRRR
RTRTNEDSSDAE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgttccttgatgaccctgaggtcaccgccgccgaggccgtgatcgacaacggctccttc
ggcaagcgcgtcgtccgcttcgagaccggccgcctcgccaagcaggccgccggctccgcc
atggcctacctcgacggcgagaccgccatcctgtccgccaccaccgtgggcaagcacccc
aaggaccagttcgacttcttcccgctcaccgtggacgtggaggagcgccagtacgccgcc
ggccgcatccccggctccttcttccgccgcgagggccgcgccggcacctccgccatcctg
gcctgccgcctcatcgaccgcccgctgcgcccgtccttcgtcaagggcctgcgcaacgag
gtccaggtcgtcgagaccgtcctcgccatccaccccgacgacgcctacgacgtcctcgcc
atcaacgcggcctcgatgtccacccagatcgccggcctgcccttcgccggcccggtcgcc
ggcacccgcctcgccctcatcgacgggcagtgggtcgccttcccgcgctggagcgagctc
gagcgcgccaccttcaacatggtcgtcgcgggccgcgtcctcgaggacggcgacgtcgcg
atcatgatggtcgaggcaggcgccaccgagaacgcctgggacctcatccaggcgggcgcg
acagcccccaccgagacggtcgtggccagcgccctcgaggccgccaagccgcacatcaag
gccctctgcgaggcccagatggaggtcgccaagcacgcctccaagcccaccgccgagttc
ccgctctacctcgactacaccgacgagcagtacgacgccgtcgagaaggccgctgagcag
ttcgacctcgccggcgccatcgccaccgagggcaagcaggcccgcgacatcgccacggac
gccgtccgcgaccaggttatcggttccctcgccgagcgcttcggaggtgaggacgacatc
aaggccctcaaggcggccttcaagtccgtcaccaagaagctcgtccgtcaccgcaccctc
accgagggcatccgcatggacggccgcggcctcaaggacatccgtaccctggccgccgag
gtcgaggtcctgccccgcgtccacgggtccgccatcttcgagcgcggcgagacccagatc
ctgggcgtcaccacgctcaacatgctgcgcatggagcagcagatcgacgacctctcgccg
atcacgcgcaagcgctacatgcaccagtacgtcttcccacccttctccaccggcgagacg
ggccgcgtcggcgccccgaagcgccgcgaggtcggccacggcgccctcgccgagcgcgcc
ctcgtcccggtcctgccgagcaaggacgacttcccctacgccatccgtcaggtctccgag
gccctcggctccaacggctccacctcgatgggctcggtctgcgcctccacgctgtccatg
ctcaacgcgggcgtgccgctcaaggcccccgtggcgggcatcgccatgggcctcatgcac
gaggagatcgacggcgagaccaagtgggccacgctcaccgacatcctcggctccgaggac
gccttcggcgacatggacttcaaggtcgccggtacccgcgacttcatcaccgccctgcag
cttgacaccaagctcgacggcctgcccagcgagatcctcgccggcgccctcggccaggcg
cgcgacgcccgcttcaagctgctcgacctcatcgacgccgccatcgacggtcccgacgag
atggcaccgacggctcctcgcgtcctcaccgtccacatcccggtggacaagatcggcgag
gtcatcggccccaagggcaagatgatcaaccagatccaggaggacaccggcgcggacctc
acggtcgaggacgacggcaccgtctacatcggcgcctccgacggcccctccgccgaggcc
gcccgcgacgccgtcaacgcgatcgccaacccgcagatgccggagatcggcgagcgcttc
gtcggcacagtcgtcaagacgaccaccttcggcgccttcgtctccctcacccccggcaag
gacggcctcctgcacatctcgcagatccgtcgcctcgtgggcggcaagcgcgtggagaac
gtcgaggacgtcctgggcgtgggtgacaaggtcaacgtcgagctggccgagatcgaccag
cgcggcaagctcagcctgcacgccgtcctcaacgaggagcagcaggccgctgaggacgag
gccagggcccaccgctccgagcgcggcgacgacgagggtgagcgccgtgagcgtcgcccg
cgccgccgctccggcgagggcgaggacggggagcgccgtgagcgccgcccgcgccgtcgc
cgcacccgtaccaacgaggactcctcggacgccgagtga
DBGET
integrated database retrieval system
