Actinomyces radicidentis: AXF14_09105
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Entry
AXF14_09105 CDS
T04288
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ard
Actinomyces radicidentis
Pathway
ard03030
DNA replication
ard03430
Mismatch repair
ard03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXF14_09105
03430 Mismatch repair
AXF14_09105
03440 Homologous recombination
AXF14_09105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ard03032
]
AXF14_09105
03400 DNA repair and recombination proteins [BR:
ard03400
]
AXF14_09105
Enzymes [BR:
ard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXF14_09105
DNA replication proteins [BR:
ard03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXF14_09105
DNA repair and recombination proteins [BR:
ard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXF14_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
DUF655
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AMD87712
UniProt:
A0A0X8JF56
LinkDB
All DBs
Position
2125696..2129295
Genome browser
AA seq
1199 aa
AA seq
DB search
MADTSSEATQETGPKDDFVHLHVHTDYSMLDGAGKIKDYVAEAKRLGQPALAITDHGYMF
GAYEFYDACKSAGIKPIIGVEAYMTPGTSRFDKTRVFWGDESQRSDDVSARGSYTHMTLL
SRNDEGLHNLMRLDSYASLEGQFGKSPRMDRELLGRYGGGLIGTSGCPSSEIQTRLRLGQ
WDEALRCAGELQDIFGKEFFYVELMDHGLEIERRVTKDLLRLAKEIGAPLVATNDSHYVR
PDDRVVQDAMLCINSGSVLTDPDRFHFDGDSYYLRPGREMRELFKEMPEACDNTLLVAEQ
CDVHYQSVDEGASFMPAFPVPEGETMESWFIKECWKGMDKRFNGNIPDDCRAQAEYEIGV
IVQMGFPGYFLVVADYINWAKDHGIRVGPGRGSGAGSIVAYAMGITELNPLNHGLIFERF
LNPERISMPDIDVDFDERRREEVIEYVKDKYGGDKISQVVTYGVIKAKQSLKDSSRVMGY
PYAVGDRLTKAMPPSIQGKDISINGIFNPQDKRYGEAEEFRKLHAEDPDAQKIVDLARGL
EGMTRQWGVHACAVIMSSATLTDVIPMMQRLQDGAYITQFDYPTCEHLGLLKMDFLGLRN
LTVISDALENIVANGKDAVDIDHIELDDRETYQMLSRGETLGVFQLDGGGMRTLLRLMKP
DNFEDISAVGALYRPGPMGADSHTNYALRKNGLQEIVPIHPELKDALEPILSTTYGLIVY
QEQVMKIAQELAGFSLGKADKLRKAMGKKKPEILAKEFVGFRQGMLDNGYSEESIQTLWD
VVVPFSAYAFNKAHSAAYGVVTYWTAFLKCHYPTEYMAAILTSQKDNKDKLAVYLGECRH
MGIQVLPPDVNDSRAQFSAVGDDIRFGLAAIRNVGTNVVDGIIAAREEKGAFESFEDFLD
KVPAVVCNKRTIDSLIKAGAFDSLGQTRRSLQACHEEFVDEVIGVKRNEAAGQFDLFASI
MGGDDAGADDVFGNGPVFSTEVPNLPEWDKKDKLAYERDMLGLYVSDHPLLGLEGVLGKL
ADVEIADLIENEERPDGAMVTVAGLITSLQRKTTKQGNLWAIAQIEDLGGSVEALFFPST
YQTVSTMLAPDTVVTVRGRLNRRDGQVALYAQEMTIPDVSSATHEAVTITLPTNRCTGPL
VERLRDVLTKHPGMSTVRLNLTSPGREVRTQLDNSLRVEASQAFYSDIKALLGPGCLKH
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacgagcagtgaggcgacccaggagaccggacccaaggacgacttcgtccac
ctccacgtccacaccgactactcgatgctcgacggcgccggcaagatcaaggactacgtc
gccgaggccaagcgcctcggccagcccgccctcgccatcaccgaccacggctacatgttc
ggcgcctacgagttctacgacgcctgcaagtccgccggcatcaagcccatcatcggcgtc
gaggcctacatgacgcccggcacctcccgcttcgacaagacccgcgtcttctggggcgac
gagtcccagcgctccgacgacgtctccgcccgcggctcctacacgcacatgacgctgctg
tcccgcaacgacgagggcctccacaacctcatgcgcctggactcctacgcctccctcgag
ggccagttcggcaagagcccgcgcatggaccgcgagctcctcggccgctacggcggcggc
ctcatcggcacctccggctgcccctcctccgagatccagacccgcctgcgcctgggccag
tgggacgaggccctgcgctgcgccggcgagctccaggacatcttcggcaaggagttcttc
tacgtcgagctcatggatcacgggctcgagatcgagcgtcgcgtcaccaaggacctcctg
cgcctcgccaaggagatcggcgccccgctcgtcgccacgaacgactcccactacgtgcgc
cccgacgaccgcgtcgtccaggacgccatgctgtgcatcaactccggaagcgtcctcacc
gacccggaccgcttccacttcgacggcgactcctactacctgcgccccggccgcgagatg
cgcgagctcttcaaggagatgcccgaggcctgcgacaacaccctcctcgtcgccgagcag
tgcgacgtccactaccagagcgtcgacgagggcgcctccttcatgcccgccttccccgtc
cccgagggcgagaccatggagtcctggttcatcaaggagtgctggaaggggatggacaag
cgcttcaacggcaacatccccgacgactgccgcgcgcaggccgagtacgagatcggcgtc
atcgtccagatgggcttccccggctacttcctcgtcgtcgcggactacatcaactgggcc
aaggaccacggcatccgcgtcggaccgggccgaggctcgggcgcaggctccatcgtcgcc
tacgccatgggcatcacggagctcaaccccctcaaccacggcctcatcttcgagcgcttc
ctcaaccccgagcgcatctcgatgcccgacatcgacgtcgacttcgacgagcgccggcgc
gaggaggtcatcgagtacgtcaaggacaagtacggcggggacaagatctcccaggtcgtc
acctacggcgtcatcaaggccaagcagtccctcaaggactccagccgcgtcatgggctac
ccctacgccgtcggcgaccggctcaccaaggcgatgccgccctccatccagggcaaggac
atctccatcaacggcatcttcaacccgcaggacaagcgctacggagaggccgaggagttc
cgcaagctccacgccgaggaccccgacgcgcagaagatcgtcgacctcgcccgcggcctg
gagggcatgacccgccagtggggcgtccacgcctgcgccgtcatcatgtcctccgcgacg
ctcaccgacgtcatccccatgatgcagcgcctccaggacggtgcctacatcacgcagttc
gactacccgacctgcgagcacctcggcctgctcaagatggacttcctgggcctgcgcaac
ctcacggtcatctccgacgccctggagaacatcgtcgccaacggcaaggacgcggtcgac
atcgaccacatcgagctcgacgaccgcgagacctaccagatgctctcccgcggcgagacc
ctcggcgtcttccagctcgacggcggcggcatgcgcaccctcctgcgtctcatgaagccc
gacaacttcgaggacatctccgccgtcggcgccctctaccgccccggccccatgggcgcg
gactcccacacgaactacgcgctgcgcaagaacgggctccaggagatcgtcccgatccac
cccgagctcaaggacgccctcgagcccatcctgtcgacgacctacggcctcatcgtctac
caggagcaggtcatgaagatcgcccaggagctcgcgggcttctccctgggcaaggccgac
aagctccgcaaggccatgggcaagaagaagcccgagatcctggccaaggagttcgtcggc
ttccggcagggcatgctggacaacggctactccgaggagtccatccagaccctgtgggac
gtcgtggtcccgttctccgcctacgccttcaacaaggcgcactccgcggcctacggcgtc
gtcacctactggaccgccttcctcaagtgccactacccgaccgagtacatggccgcgatc
ctcacgtcccagaaggacaacaaggacaagctcgccgtctacctcggcgagtgccgccac
atgggcatccaggtcctcccgccggacgtcaacgactcccgcgcccagttctccgccgtc
ggggacgacatccgcttcggcctggccgcgatccgcaacgtcggcacgaacgtcgtcgac
gggatcatcgccgcccgcgaggagaagggcgccttcgagagcttcgaggacttcctcgac
aaggtgcccgcggtcgtctgcaacaagcgcaccatcgactccctcatcaaggccggcgcc
ttcgactccctcggtcagacccgtcgcagcctccaggcctgccacgaggagttcgtcgac
gaggtcatcggcgtcaagcgcaacgaggccgccggccagttcgacctgttcgcctcgatc
atgggcggcgacgacgccggcgccgacgacgtcttcggcaacggcccggtcttctccacc
gaggtcccgaacctgcccgagtgggacaagaaggacaagctcgcctacgagcgcgacatg
ctcggcctctacgtctccgaccacccgctcctgggcctcgagggcgtcctgggcaagctc
gccgacgtcgagatcgcggacctcatcgagaacgaggagcggcccgacggcgccatggtg
accgtcgccggcctcatcacgtcgctgcagcgcaagacgacgaagcagggcaacctctgg
gccatcgcccagatcgaggacctcggcggctccgtggaggcgctgttcttcccgagcacg
taccagacggtctcgacgatgctggcgccggacaccgtggtgaccgtgcgcgggcgcctc
aaccgccgcgacggccaggtggcgctctacgcgcaggagatgaccatcccggacgtctcc
tccgcgacgcacgaggccgtcaccatcaccctgccgacgaaccgctgcaccgggccgctc
gtggagcgtctgcgcgacgtcctcacgaagcacccggggatgtcgacggtgcgcctcaac
ctcacgagccccggtcgtgaggtgcgcacgcagctcgacaactcgctgcgtgtcgaggcc
tcgcaggccttctactccgacatcaaggcgctgctcggaccgggctgcctcaagcactga
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