Actinomyces radicidentis: AXF14_09250
Help
Entry
AXF14_09250 CDS
T04288
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ard
Actinomyces radicidentis
Pathway
ard03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF14_09250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ard03019
]
AXF14_09250
03400 DNA repair and recombination proteins [BR:
ard03400
]
AXF14_09250
Enzymes [BR:
ard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXF14_09250
Messenger RNA biogenesis [BR:
ard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXF14_09250
DNA repair and recombination proteins [BR:
ard03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXF14_09250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
Cas3-like_C_2
RecQ_Zn_bind
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AMD87737
UniProt:
A0A0X8JFP4
LinkDB
All DBs
Position
complement(2167677..2169992)
Genome browser
AA seq
771 aa
AA seq
DB search
MSETSSPSATSTHSPIRERAEAVLRELVGRADAALREDQWRAIEALVVDHRRALVVQRTG
WGKSAVYFVSTVLLREGWAGWRDGAPVPSPGARTGAGATVIISPLLALMRDQVSAAQRAG
INAVTMNSANATQWDEIEGQVRDGAVDVLLVSPERLNNPVFRDEVLPHLAADAGLVVIDE
AHCISDWGHDFRPDYRRIRTLLAELPPATPVLATTATANRRVTDDVAEQLAGRAMGREAP
EVLVLRGTLERESLHLGVRTLPDAATRLAWLTDYLRSQPGSGIVYCLTVSAAGEVAQRLR
EAGLKVATYTGQTDPAERERLEVSLKENRVKALVATSALGMGFDKPDLGFVVHVGAPSSP
VSYYQQVGRAGRGVARAEVVLLPGAEDRSIWEWFGAQGFPPEPDVREVLAGLDAARAEGN
GVMSTNVLETVTSLRRTRLESMLKVLDVDGAVRRVRGGWESTGESWVYDAERYQRVEAAR
LAEQDSMLRYERLEAPECRMAFLRAALDDPEMPEGWRCGKCDLCGGLDLAAAASATEVEA
ARESLTRVGVSLEPRKQWPTGMARLGLPDLKGKIKEDERLGEGMAVGRLDGLGISGPLRD
LVESGEDGEVPAVLRGPVLEVADRLGSLIDSGDADGDGLPDGEEPWDGADGDGAGGPGEL
VVVIVESRRRPQLVRQLGRAVAHQLAARPLGIMGVTGEPGRHDVGSAFRLADVARSLTMA
DWSRNALAGLQGARVVLVDDWTDSGWTLTVAGAMLLQGGAASVHPFVLAQR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgagcagccccagcgccacctccacgcactcccccatccgcgagcgcgcc
gaggcagtcctccgcgagctcgtcggccgcgccgacgccgccctgcgcgaggaccagtgg
cgcgccatcgaggcgctcgtcgtcgaccaccgccgcgcgctcgtcgtccagcgcaccggc
tggggcaagtcggccgtctacttcgtctccaccgtgctcctgcgcgagggctgggccggc
tggcgcgacggcgcccccgtcccctcccccggcgcgcgcaccggcgccggcgcgaccgtc
atcatctcgccgctcctcgccctcatgcgggaccaggtgagcgccgcccagcgcgcaggc
atcaacgccgtcaccatgaactcggccaacgccacccagtgggacgagatcgaggggcag
gtccgcgacggcgccgtcgacgtcctcctcgtctcccccgagcgcctcaacaaccccgtc
ttccgcgacgaggtcctcccccacctcgccgccgacgccgggctcgtcgtcatcgacgag
gcgcactgcatctccgactggggccacgacttccgccccgactaccgccgcatccgcacg
ctgctcgccgagctgccgcccgccacgcccgtcctggcgacgacggccacggccaacagg
cgcgtcaccgacgacgtcgccgagcagctcgccgggcgcgccatgggccgcgaggcgccc
gaggtcctcgtcctgcgcggcacgctcgagcgcgagtccctccacctgggcgtgcgcacc
ctcccggacgcggcgacgcgcctggcctggctcaccgactacctgcgctcccagccggga
tcgggcatcgtctactgcctcaccgtctccgccgccggcgaggtcgcccagcgcctaagg
gaggcgggcctcaaggtcgccacctacaccgggcagacggacccggccgagcgcgagcgc
ctcgaggtgagcctcaaggagaaccgggtcaaggccctcgtcgcgacgagcgccctcggc
atgggcttcgacaagccggacctcggcttcgtcgtgcacgtcggggcgccgagctcgccc
gtgtcctactaccagcaggtcggccgcgccggccgaggggtcgcgcgagccgaggtcgtc
ctcctgccgggcgccgaggaccgctccatctgggagtggttcggcgcccagggcttcccg
cccgagccggacgtccgcgaggtcctcgccgggctcgacgccgcccgcgccgagggcaac
ggagtcatgagcacgaacgtcctcgagacggtgaccagcctgcggcgcacgcgcctggag
tcgatgctcaaggtcctcgacgtcgacggcgccgtgcggcgggtgcgcggcggctgggag
tcgacgggcgagtcctgggtctacgacgccgagcgctaccagcgcgtcgaggccgcccgc
ctcgccgagcaggactcgatgctccgctacgagcgcctcgaggcgccggagtgccgcatg
gccttcctgcgcgccgccctcgacgacccggagatgcccgagggctggcgctgcgggaag
tgcgacctgtgcggcgggctcgacctcgccgccgccgccagcgcgaccgaggtggaggcc
gcccgcgagtccctcacccgcgtgggcgtcagcctcgagccgcgcaagcagtggcccacc
ggcatggcccggctcgggctgccggacctcaaggggaagatcaaggaggacgagcggctc
ggcgagggcatggccgtcgggcgcctcgacggcctcgggatctccggcccgttgcgcgac
ctcgtggagtccggcgaggacggcgaggtaccggctgtcctgcgcggcccggtgctcgag
gtcgcggaccgcctcggttccctcatcgactccggggacgccgacggcgacggcctgccc
gacggcgaggagccctgggacggggccgacggcgacggcgcgggcgggccgggtgagctc
gtcgtcgtcatcgtggagtcgcggcgccggccccagctcgtgcgtcagctcggccgggcc
gtcgcccaccagctcgcggcacggccgctcgggatcatgggcgtcaccggcgagcccggc
cggcacgacgtcggctccgccttccgcctcgccgacgtggcccggtcgctgaccatggcg
gactggagccgcaacgcgctcgccggcctgcagggtgcgcgggtcgtcctcgtcgatgac
tggaccgactccggctggaccctcaccgtggccggcgcgatgcttctgcagggcggggcc
gcgagcgtgcaccccttcgtcctcgcgcagcgctga
DBGET
integrated database retrieval system
