Actinomyces radicidentis: AXF14_10700
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Entry
AXF14_10700 CDS
T04288
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
ard
Actinomyces radicidentis
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ard03019
]
AXF14_10700
Enzymes [BR:
ard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AXF14_10700
Messenger RNA biogenesis [BR:
ard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AXF14_10700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
AMD87959
UniProt:
A0A0X8JG16
LinkDB
All DBs
Position
2522822..2525773
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AA seq
983 aa
AA seq
DB search
MSSPAERFAAARRRQAASRTELARFATQFDFPLDDFQVAGCEALERGEGVLVAAPTGAGK
TIVGEFAVHLALAKGLKAFYTTPIKALSNQKYLDLVARHGAERVGLLTGDTSVNPHADVI
VMTTEVLRNMLYSGSRDLERLGFVVMDEVHYLADRFRGPVWEEVIIHLAPEVQVVSLSAT
VSNAEEFGDWLGHVRGRTAVVVSEHRPVPLTQHMMVGRLLLDVHSVPVAIEDADSEKQLA
AQPPLNPDLLKAVRNARRAAAGESGPSKTSRASQGGGGHRQPWKRGASGRGRAPRRGADG
ARTARLRPPSRGTVIHALEDARLLPAIVFVFSRNGCEQAVRQAVESGVDLTTEEESRRIR
EVIDRRTAEIPAGDLGVLGFRSWAHALERGVAAHHAGLLPVFKETVEELFSAGLVKVVYA
TETLALGINMPARTVVLESLRKWNGSAHVTLTPGEYTQLTGRAGRRGIDVEGHAVVLAAD
DVEPAFVSSLASRRTYPLVSAFRPTYNMAVNLLGRTSRARAREVLESSFAQYQADRGVVE
LAAEARRKRRSLAGLEEQMSCRLGDFREYALLRQRITDAEADLSREKREARRATASREMT
GLHRGDVVVYRKGRRQKHGVVLSVGEDRQGTPALTVLGEDSRVLTLTPDTAPDGVMRVGS
MRVVGSVDVRRPKDRDRLVGRLIDAIRSGDLDGSATRQRRRTRGGKPIEGAADRTEPALT
AAERVEALRHEMRSHPCHACPDREEHARTGRKWAKAAAEVERLTARIETRTGTIARQFDA
VCQVLLELGYLEPVDRGYPERELRVTDAGRVLARVYAERDLLVAECLRRGTWSGLGPEEL
AGAVSGCVYEPRLTAQSIGLPVSPGSRLGAVLREELSLSRRINDLESLARIEPTRGAEPA
LAGAVQAWCEGAELAEVLDATELTAGDFVRWCKQLLDVLGQLATITPARDADAETARELT
RLSMTAAEGVMGVSRGVVAWSAV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcccgcagaacgcttcgcggccgcacgacgtcggcaggccgcctcccggacc
gagctggcgcgcttcgccacgcagttcgacttccccctcgacgacttccaggtggccggg
tgcgaggccctcgagcgcggcgagggcgtcctcgtcgccgcccccaccggcgccggcaag
accatcgtcggcgagttcgccgtgcacctggccctggccaaggggctcaaggccttctac
acgacgcccatcaaggccctgtccaaccagaagtacctcgacctcgtcgcccggcacggc
gcggagagagtcgggctcctcaccggcgacacctccgtcaacccgcacgccgacgtcatc
gtcatgacgaccgaggtgctgcgcaacatgctctactcgggctcccgtgacctcgagcga
ctcggcttcgtcgtcatggacgaggtccactacctcgccgaccgcttccgcggacccgtc
tgggaggaggtcatcatccacctcgcccccgaggtccaggtggtctccctgtccgcgacc
gtctccaacgccgaggagttcggcgactggctcgggcacgtgcgcggccgcaccgccgtc
gtcgtctccgagcaccggcccgtgcctctcacccagcacatgatggtggggcgactcctc
ctcgacgtccactcggtccccgtcgccatcgaggacgccgactccgagaagcagctcgcc
gcgcagccgcccctcaaccccgacctgctcaaggccgtgcgcaacgcacgtcgcgcggcg
gcgggggagtccggcccctcgaagacctcgcgcgcctcccagggcgggggcggtcaccgc
cagccctggaagcgcggcgcctccgggcgcgggcgcgcaccgcgccgcggggccgacggc
gcccgcaccgcccgactgcgcccgccctcgcgcggcaccgtcatccacgccctggaggat
gcccgcctcctgccggcgatcgtcttcgtcttctcccgcaacggctgcgagcaggccgtc
cgccaggccgtcgagtccggcgtcgacctcaccaccgaggaggagtcgcggcgcatccgc
gaggtcatcgaccgccgcaccgcggagatccccgccggcgacctcggcgtcctcggcttc
cgttcctgggcccacgccctcgagcgcggcgtcgccgcccaccacgccggcctcctgccc
gtcttcaaggagaccgtcgaggagctcttctccgcgggcctcgtcaaggtcgtctacgcg
acggagacccttgcgctcggcatcaacatgccggcccgcaccgtcgtgctcgagtccttg
cgcaagtggaacggctccgcgcacgtcactctcacgccgggggagtacacccagctcacc
ggccgcgccggccgccgcggcatcgacgtcgagggccacgccgtcgtcctcgccgccgac
gacgtcgagccagccttcgtctcctccctcgcctcccggcgcacctacccgcttgtgtcc
gccttccgccccacctacaacatggccgtcaacctcctggggcgcacgagccgggcgcgc
gcccgagaggtcctcgagtcctccttcgcccagtaccaggccgaccgcggcgtcgtcgag
ctggccgcggaggcccgccgcaagcgccgctcgctcgccggtctcgaggagcagatgagc
tgccgcctgggagacttccgggagtacgcgctgctccgccagcgcatcaccgacgcggag
gcggacctctcccgcgagaagcgcgaggcccgccgcgccacggccagccgggagatgacg
ggcctgcaccgcggcgacgtcgtcgtctaccgcaagggccggcgccagaagcacggcgtg
gtcctgtccgtgggggaggaccgccagggcacgcccgccctcacggtcctcggcgaggac
tcccgcgtcctcaccctcaccccggacaccgcccccgacggcgtcatgcgcgtcggctcg
atgcgggtggtcgggagcgtggacgtgcgccgccccaaggaccgcgaccgcctcgtcggc
cggctcatcgacgccatccgctccggggacctcgacggctccgccacccggcagcggcgc
cgcacccgcggcggcaagccgatcgagggggcggccgacaggaccgagcccgcgctcacc
gccgcggagcgcgtcgaggcgcttcgccacgagatgcgctcccacccctgccacgcctgc
cccgaccgggaggagcacgcccgcaccggccgcaagtgggccaaggcggccgccgaggtc
gagcgcctcaccgcgcgcatcgagacgcgcaccggcaccatcgcccgccagttcgacgcc
gtctgccaggtcctcctcgagctcggctacctcgagcccgtcgaccgcgggtaccccgag
cgcgagctgcgcgtcaccgacgccgggcgcgtcctcgcccgcgtctacgccgagcgcgac
ctcctcgtcgccgagtgcctgcgccgggggacctggtccggcctgggcccggaggagctc
gccggcgccgtctcgggctgcgtctacgagccgcgcctcaccgcgcagtccatcggtctg
cccgtctcaccgggctcgcgcctcggcgccgtcctgcgcgaggagctgagcctgtcgcgg
cgcatcaacgacctcgagtccctggcccgcatcgagccgacccgcggcgccgagcccgcg
ctcgccggcgctgtccaggcctggtgcgagggagccgagctcgccgaggtcctcgacgcc
accgagctcacggccggcgacttcgtgcgctggtgcaagcagctcctcgacgtcctcggc
cagctcgccacgatcacgcccgcccgggacgccgacgccgagaccgcgcgcgagctgacc
cggctgtcgatgacggcggcggagggcgtcatgggcgtgagccgcggcgtcgtcgcctgg
tccgccgtctga
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