Actinomyces respiraculi: ID810_01135
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Entry
ID810_01135 CDS
T07562
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
arep
Actinomyces respiraculi
Pathway
arep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ID810_01135
09124 Replication and repair
03420 Nucleotide excision repair
ID810_01135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arep03021
]
ID810_01135
03400 DNA repair and recombination proteins [BR:
arep03400
]
ID810_01135
Enzymes [BR:
arep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ID810_01135
Transcription machinery [BR:
arep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ID810_01135
DNA repair and recombination proteins [BR:
arep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ID810_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPL05631
UniProt:
A0A7T0PVT7
LinkDB
All DBs
Position
complement(266276..267958)
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AA seq
560 aa
AA seq
DB search
MPATPGPPDGPLIVQSDKTVLLEVAHPAADDARRAIAPFAELERAPEHIHTYRITPLALW
NARAAGLDPETVIHVLITYSRFPVPHSLLTEVAETMGRYGRLQLLSDPAHGLVLHATDVP
VLEEVARSRRTAGMLGERLSPEDVVVHPSERGNLKQALIKLGWPAEDLAGYVDGERHPIT
LTDDPAGAAAHAPGAFALRPYQSQAVEAFWAGGSGVVVLPCGAGKTLVGAACMARSSTTT
LILVTNAVSARQWKEELVRFTSLTEDEIGEYSGSRKEVRPVTIATYQVLTTRRKGVYPHL
DLLDAHDWGLIVYDEVHLLPAPVFRMTAELQARRRLGLTATLVREDGREDEVFSLIGPKR
YDAPWKDLENQGWIAPAVCTEVRLALEAGERMTYATASPEDRYRLAATTPRKIGVVDQLL
ARHPGESALVIGQYVDQLEEIAEHLGAPLITGATTVRERQRLYAAFRSGQVGTLVVSKVA
NFSIDLPGASVAVQVSGSFGSRQEEAQRLGRIVRPKEDGRQAHFYTVVARDTVDQDIAAH
RQRFLAEQGYAYDVVDAADL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacgcccggcccgcccgacggccccctcatcgtccagagcgacaaaaccgtc
ctgcttgaggtcgcccaccccgccgccgacgacgcccgccgcgccatcgcacccttcgcc
gagctcgagcgggcccccgagcacatccacacctaccgcatcaccccgctggccctgtgg
aacgcccgcgccgccggcctcgaccccgagaccgtcatccacgtcctcatcacctactcg
cgcttccccgtcccgcactccctgctgaccgaggtcgccgagacgatgggccgctacggc
cgcctccagctgctctccgacccggcgcacgggctcgtgctgcacgccacggacgtgccc
gtgctcgaggaggtcgcgcgctcgcggcgcaccgccgggatgctcggtgagcgcctgtcc
cccgaggacgtcgtcgtccacccctccgagcgcggcaacctcaagcaggcgctcatcaag
ctgggctggcccgcggaggaccttgccggctatgtcgacggcgagcgccaccccatcacc
ctgaccgacgaccccgcgggggccgccgcgcacgcacccggcgccttcgcgctgcgcccg
taccagtcccaggcggtcgaggccttctgggcgggcggcagcggcgtcgtcgtcctgccc
tgcggggccggcaagaccctcgtgggggccgcctgcatggccaggagctcaacgacgacg
ctcatcctcgtgaccaacgcggtctcggcccgccagtggaaggaggagctggtgcgcttc
acctccctcaccgaggacgagatcggcgagtactcgggctcgcgcaaggaggtgcgaccg
gtcaccatcgccacctaccaggtgctcaccacccgccgcaaaggcgtctatccccacctg
gacctgctcgacgcccacgactggggtcttatcgtctacgacgaggtgcatctgctgccc
gccccggtcttccgcatgacggcggagctgcaggcacgccgtcggctcgggctgacggca
acgctcgtgcgcgaggacggccgtgaggacgaggtgttcagcctcatcgggcccaagcgc
tacgacgcgccgtggaaggatctggagaaccaggggtggatcgcgcccgccgtctgcacg
gaggtgcgcctggccctcgaggccggcgagcgcatgacctacgcgaccgcctcgcccgag
gaccgctaccggctggccgcgacgaccccgcgcaagatcggcgtggtcgaccagctgctt
gcccgccaccccggcgagagtgcgctcgtcatcggccagtacgtcgaccagctcgaggag
atcgccgagcacctgggggccccactcatcaccggggcgacgacggtccgcgagcgtcag
cggctctacgccgccttccgctccggtcaggtgggcacgctcgtggtgtccaaggtcgcc
aacttctccatcgacctgccgggggcctcagtggcggtgcaggtcagcggatctttcggc
tcgcgccaggaggaggcgcaacgcctgggccggatcgtgcggccgaaggaggatgggcgc
caggcccacttctacacggtggtcgcgcgcgacacggtggaccaggacatagcggcgcac
cgtcaacgtttcctggccgagcaggggtatgcctacgacgtcgtggacgccgcggacctg
taa
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