Actinomyces respiraculi: ID810_05945
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Entry
ID810_05945 CDS
T07562
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
arep
Actinomyces respiraculi
Pathway
arep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ID810_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arep03019
]
ID810_05945
03009 Ribosome biogenesis [BR:
arep03009
]
ID810_05945
Enzymes [BR:
arep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ID810_05945
Messenger RNA biogenesis [BR:
arep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ID810_05945
Ribosome biogenesis [BR:
arep03009
]
Prokaryotic type
rRNA helicases
ID810_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
QPL06426
UniProt:
A0A7T0PWH3
LinkDB
All DBs
Position
complement(1423908..1426445)
Genome browser
AA seq
845 aa
AA seq
DB search
MTPGSTTPSDGPLSLDALFKAEVNRTDGDAVASPTDSTSAACADSFESASSFDTPASSDS
PEDPEDVDHEDEEDDVDTAAALALEENDPEDPDDEAEVEDDGAEDLDEDEVDGHAPFVDD
GEDEEEQVDKAPEEVTFSDLGLPADLLKAVTDMGFTTPTPIQREAIPVLLGGRDVVGVAQ
TGTGKTAAFGLPLLDAVDSRDGTVQALVLAPTRELAIQSTDAITDMAQRSRGLDVVAVYG
GAPYGPQIGALKGGAQVVVGTPGRIIDLIEKGALHLEDVRFFVLDEADEMLRMGFAEDVE
TIASSLPAERRTALFSATMPPAIQAVARQHLTDPQRIEVSRQSSTVDTVHQTYAVVPFRH
KIGAVSRVLAVTDAAAAIVFVRTKSTAEDVAIELAGRGIQAAAISGDVPQRERERLVERL
RQGTLDVLVATDVAARGLDVERIGLVVNFDVPREAGAYVHRIGRTGRAGRHGEAVTFLTP
KEKGKLRQIERLTGTRLEEITLPSPADVSRHRAGTLLGKAAARLERGRLEMYTELVTAKA
AELEIEVEDLAATLMALAVGDEGPRTWKERKEEPRQRVRREETVDSEGTFVSASFEGGRD
RDDRRGRGERPDGKPGAARGGRRRHEDGTGTVYRVEVGHRDRVLPGAIVGALANEGGISG
SDIGKIDILQSFSLVEIHAPLSAEQLEAMSHATFGGRELRIHPDEGPGRGWDGSDNPSSE
SQQRRTERPRFDRDGERGGFRRDNDRGGFRGGRGGFRGGRDGERGGFRRDNDRGGFRGGR
DNERGGFRGGRDGERGGFRRDNDRGGFRGGRDNERGGFRRDNDRGGFRGGRDSGRGGFRR
DNDRW
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacccctggcagcactacgccctctgacgggcccctgagcctcgacgccctcttcaag
gccgaggtcaaccgcaccgacggcgacgccgtcgcctcccccacggactcgacgtcggcg
gcctgcgccgactccttcgagtccgcctcctccttcgacacccccgcctcctccgactcc
cccgaggacccggaggacgtcgaccacgaggatgaggaggacgacgtcgacacggccgcc
gccctcgcccttgaggagaacgaccccgaggaccccgacgacgaggcggaggtcgaggac
gacggtgccgaggacctcgacgaggacgaggttgacggccacgcccccttcgtcgacgac
ggcgaggacgaggaggagcaggtggacaaggcccccgaggaggtcaccttcagcgacctg
ggcctgcccgccgacctgctcaaggccgtgacggacatgggctttaccacccccaccccc
atccagcgcgaggccatccccgtgctgctcggagggcgcgacgtcgtcggcgtcgcccag
accggtaccggcaagaccgccgccttcggcctgcccctgctcgacgccgtcgactcgcgt
gacggcacggtccaggcactcgtcctggcccccacccgcgagctcgccatccagagcacc
gacgccatcaccgacatggcccagcgctcgcgcggcctcgacgtcgtcgccgtctacggc
ggcgccccctatggcccgcagatcggcgccctcaagggcggcgcgcaggtcgtcgtcggc
acccccggccgcatcatcgacctcatcgagaagggcgccctgcacctggaggacgtgcgc
ttcttcgtcctggacgaggccgacgagatgctgcgcatgggcttcgccgaggacgtggag
accatcgcctcctccctgcccgccgagcgccgcaccgccctgttctcggcgacgatgccg
ccggccatccaggccgtcgcccgccagcacctgaccgaccctcagcgcatcgaggtctcg
cgccagtcctccaccgtggacaccgtccaccagacctacgcggtcgtgcccttccgtcac
aagatcggggccgtctcacgcgtcctggccgtcaccgacgccgccgccgccatcgtcttc
gtgcgcaccaagtccacggctgaggacgtcgccatcgagctcgcgggccggggtatccag
gctgccgccatcagcggtgacgtgccccagcgtgagcgtgagcgcctggtcgagcgcctg
cgccagggcacgcttgacgtcctcgtcgccaccgacgtggccgcccgcggtctcgatgtc
gaacgcatcgggctcgtcgtcaacttcgacgtgccccgtgaggccggggcctacgtacac
cgcatcggtcgcactggccgcgccggccgccacggtgaggccgtcaccttcctcaccccc
aaggagaagggcaagctccgccagatcgagcggctgaccggcacccgcctggaggagatc
accctgccctcgccggccgacgtctcacgccaccgcgcgggcacactgctgggcaaggcc
gctgcgaggctcgagcgtggccgcctcgagatgtacaccgagctcgtcaccgccaaggcc
gccgagctcgagatcgaggtcgaggacctggccgcgaccctgatggccctcgccgtgggc
gacgagggcccccgcacctggaaggagcgcaaggaggagccacgtcagcgcgtgcgccgc
gaggagaccgtggactccgagggcaccttcgtgtccgcctccttcgagggcggccgggac
cgtgatgaccgccgtgggcgcggtgagcgtcccgacggcaagcccggcgccgcccgtggt
ggtcgccgcaggcacgaggacggcaccggcaccgtctaccgggtcgaggtcggtcaccgt
gaccgcgtcctgcccggcgcgatcgtcggcgcgctggccaacgagggcgggatctccggc
tccgacatcggcaagattgacatcctccagtccttctcccttgtggagatccacgcgccc
ctgtccgcggagcagcttgaggccatgagccacgcgaccttcggtgggcgcgagctgcgc
atccaccccgacgagggtccgggccgcggctgggacggttccgacaacccgtcctctgag
agccagcagcgccgcaccgagcgtccccgttttgatcgcgacggcgagcgtggcggcttc
cggcgcgacaacgaccgtggtggcttccgcggcggacgcggtggtttccgcggtgggcgt
gacggcgagcgtggcggcttccgccgcgacaacgaccgtggtggcttccgcggcggacgt
gacaatgagcgtggcggcttccgtggcggacgtgacggcgagcgcggcggcttccggcgc
gacaacgaccgtggcggcttccgcggcggacgtgacaatgagcgtggcggcttccgccgc
gacaacgaccgtggcggcttccgcggcgggcgcgacagcgggcgcggtggcttccgccgt
gacaacgaccgttggtga
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