Actinomyces respiraculi: ID810_07740
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Entry
ID810_07740 CDS
T07562
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
arep
Actinomyces respiraculi
Pathway
arep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ID810_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arep03019
]
ID810_07740
03009 Ribosome biogenesis [BR:
arep03009
]
ID810_07740
Enzymes [BR:
arep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ID810_07740
Messenger RNA biogenesis [BR:
arep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ID810_07740
Ribosome biogenesis [BR:
arep03009
]
Prokaryotic type
rRNA processing factors
ID810_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
QPL04679
UniProt:
A0A7T0LJ16
LinkDB
All DBs
Position
complement(1859131..1862289)
Genome browser
AA seq
1052 aa
AA seq
DB search
MTPDQSLEATEGEVTAPTEPTESTVQAPAAEAAPKARRRRATSKATAPTKAPAAKTPVPS
ADGEGSGAGASDDAGNGTVTGDAVAEDPSTTSAKPARRTGTRPRRAAAPAAAGAEDAKTK
DAKTKATRTKAAKTKAAKTKDAETKGAKAKDTKTTASKAKGSKTKDASTEDTKTEDITTQ
AAKPAARAPRRRRVTAAQAAPEADPAPEAAGEPEVLASPTDVTAEATVSSAGTAEASTGD
DTGTADSADSPDEEGAAAETAETAETDEAPRLPAASLLFQAPDPSRARRRRKVTAVQAAP
QAAPEVEDVAPAAPAEPAAERSQDQDQAPATPPASRGRRRRKVTASQATPEAAPAPQPAV
APKVTETTTPEPDESETTEPDATETEETAASEAGDSTDAAEGGRRKRRRGGRGRRSRSRS
DEATESAEASETAGSTAPTADSSDETPTGPGSVDETDGDEEDEISSRRRRRRRSRSSRAE
SGRESRDVRDEVTALKGSTRLEAKRQRRREGRAAGRRRPIVTEAEFLARRESVDRQMIIR
EQDGLNQIAVLEDGLLVEHYVARHTQTSMVGNVYVGRVQNVLPSMEAAFVDLGKGRNAVL
YAGEVNWDAAGMEGKPRRIEDALSSGDTVLVQVTKDPIGHKGARLTSQVTLAGRYLVLVP
GGTMTGISRKLPDTERARLKKILKKIVPDAAGVIVRTAAEGASEEQLTADVERLLKQWQS
IDKKATRVLAGSGKAPVLLKGEPELAVRVVRDVFNEDFRSLTVQGHDAWATISEYVTELS
PDLADRLQHWVSPEDVFSAHRIDEQLAKGFDRKVWLPSGGTLIIDRTEAMTVIDVNTGRF
TGAGGTLEETVTRNNIEAAEEIVRQLRLRDIGGMIVIDFVDMVLESNRDLVLRRLVECLG
RDRTRHQVTEVTSLGLVQMTRKRVGQGLVEAFSTPCECCGGRGFIVHSDPVENQQADLNA
SASRSVGRGRGRKGSSEAASEERPRKGSSRRRGKEDADDVIDDQTRAAVRGALAQIAAAA
EHAHKDADSSPEAGAAEAPTAEVGAAEQDAQD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaccagtccctcgaagccactgagggcgaggtcacggcacccactgaaccc
actgaatccactgtgcaggctcctgccgccgaggcggctcccaaggcgcgccgccgccgc
gcgacgtccaaggccaccgcccccaccaaggcccccgcggccaagacccccgtaccgtcg
gccgacggcgagggatccggtgctggcgcatcggacgacgcggggaacggcactgtgact
ggggatgctgtggctgaggatccctcgaccacaagcgcgaagcccgcccgtcgcacgggt
acccgcccccggcgcgccgcggccccggccgccgcaggagctgaggacgccaagaccaag
gacgccaagaccaaggccaccaggaccaaggccgccaagaccaaggccgccaagaccaag
gacgccgagaccaagggcgccaaagccaaggacacgaagaccacggcatctaaggccaag
ggttctaagaccaaggacgccagcaccgaggacacgaagaccgaggacatcacgacgcag
gctgcgaagcccgcggcgcgcgcccctcgtcgtcgtcgggtcaccgccgcccaggcggcc
cccgaggccgaccccgcccccgaggccgccggtgagcccgaggtcctggccagtcccacc
gatgtcacggccgaggccaccgtctccagcgccggcaccgccgaggcctccaccggcgat
gacaccggcactgccgacagtgccgacagcccggacgaggagggcgccgccgctgagact
gccgaaaccgctgagactgacgaggcaccgcgcctgcctgccgcatctctcctcttccag
gcgcccgacccctcccgcgcccgccgtcgtcgcaaggtcacggccgtccaggccgccccg
caggccgcccccgaggtcgaggacgtggccccggcggcccccgccgagccggccgccgag
cgctcacaggaccaggaccaggcccccgccacgccccccgcctcgcgcggacgccgtcgt
cgcaaggtcaccgcctcccaggccacccccgaggctgctcccgccccgcagccggctgtc
gcccccaaggtcaccgagacgaccacgccggagcccgacgagtcggagacgactgagccg
gacgcgaccgagaccgaggagaccgccgcctccgaggccggcgactccactgacgccgct
gagggcgggcgccgcaagcgccgccgcggcggtcgtggccgccgctcccgctcgcgctcc
gacgaggccaccgagtccgctgaggccagtgagaccgctgggtccacagcgcccacggcc
gactcatccgacgagacccccaccggtcccggcagtgtcgacgagaccgacggcgatgag
gaggacgagatcagctcgcgtcgtcgtcgccgtcgccgttcccgctcgtcccgtgccgag
agcggccgtgagagccgcgacgtgcgcgacgaggtcaccgcgctcaagggctccacccgc
ctggaggccaagcgccagcgccgccgtgaggggcgcgccgccggacgccgtcgccccatc
gtcaccgaggccgagttcctggcccgccgcgagagcgtcgaccggcagatgatcatccgc
gagcaggacggcctcaaccagatcgccgtcctcgaggacgggctgctcgtcgagcactac
gtcgcccgccacacccagacctccatggtcggcaacgtctacgtcggccgcgtccagaac
gtcctgccgtcgatggaggccgccttcgttgacctgggcaagggccgcaacgccgtgctc
tacgccggcgaggtcaactgggacgccgccggtatggagggcaagccgcgccgcatcgag
gacgccctctccagcggcgacaccgtcctcgtgcaggtcaccaaggaccccatcggtcac
aagggtgcgcgcctgaccagccaggtcactctcgccggccgctacctcgtcctcgtgccc
ggcggcacgatgaccggtatctcccgcaagctgcccgacaccgagcgtgcccgcctgaag
aagatccttaagaagatcgtgcccgacgccgccggtgtcatcgtgcgcaccgccgccgag
ggcgccagcgaggagcagctgaccgccgatgtcgagcgactgctcaagcagtggcagtcc
atcgacaagaaggccacgcgggtgctcgccggctccggtaaggcacctgtcctgctcaag
ggcgagcccgagctcgccgtgcgcgtcgtacgcgacgtgttcaacgaggacttccgctcc
ctgaccgtgcagggccacgatgcctgggccacgatcagtgagtacgtcaccgagctcagc
ccggacttggccgaccgcctccagcactgggtgagcccggaggacgtcttcagcgcccac
cgcatcgacgagcagctcgccaagggcttcgaccgcaaggtctggctgcccagcggcggc
accctcatcatcgaccgcaccgaggccatgacggtcatcgacgtcaacaccggccgcttc
accggcgccggcggcacgctcgaggagaccgtcacccgtaacaacatcgaggcggccgag
gagatcgtccgtcagctgcgcctgcgcgacatcggcggcatgatcgtcatcgacttcgtc
gacatggtcctggagtccaaccgtgacctcgtgctgcgccgcctggtcgagtgcctgggc
cgcgaccgcacccgtcaccaggtcacggaggtcacgagcctcggtctggtgcagatgacc
cgtaagcgcgtcggccagggcctcgtcgaggccttctccacgccctgtgagtgctgcggt
gggcgtggcttcatcgttcactccgacccggtggagaaccagcaggcggacctcaacgcc
tccgcctcgcgctcggtcggccgcggtcgcggccgtaagggctcgtccgaggccgcctcg
gaggagaggccccgcaagggctcctcacgccgccggggcaaggaggacgccgacgacgtc
atcgacgaccagacccgtgccgccgtgcgcggggccctggcccagatcgccgctgccgcc
gagcacgcccacaaggacgcggactcgtccccggaggccggcgccgccgaggctcccacc
gccgaggtcggcgccgccgaacaggacgcccaagattga
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