Actinomyces respiraculi: ID810_09635
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Entry
ID810_09635 CDS
T07562
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arep
Actinomyces respiraculi
Pathway
arep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ID810_09635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arep03021
]
ID810_09635
03400 DNA repair and recombination proteins [BR:
arep03400
]
ID810_09635
Enzymes [BR:
arep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ID810_09635
Transcription machinery [BR:
arep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ID810_09635
DNA repair and recombination proteins [BR:
arep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ID810_09635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QPL04996
UniProt:
A0A7T0LJL7
LinkDB
All DBs
Position
complement(2303074..2307030)
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIKSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRRDDLPSLRNELEVKKKHVEEAGQADVEARQRRLEEE
LAQLEAEGAEQSQRDRLRKVAEREMGALRRKNARTLEHMDRVWDRFVGLKVGDLEGDEVL
YRDMVADYGIYFKGAMGAEAIQARLRTFDLAAEAETLSEVVANGTGQRKTRAIKRLKVIN
AFRITGTAPESMVLDNIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPTIIVNNEKRMLQDAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELKEAQNVKAAKRMVERAN
PKVWDILAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGTYHLTQTPDPTAPVEV
DAEGNEVVPSFSSFAEAVMAHDFGKLHVNATVDIRFEEGITAPEGWKAPEGWSEGDPITL
RTSLGRALFNTALPETFPYVNYVVDKKKLGNIVNTLAEGYPRVDVAASLDALKANGFYWS
TWSGITVAYADVVSPDSKPAILARYEAEAQEIEDQFDLGALTEEDRYQSLIDIWTKATNE
VAEAMRENFPARNAVYQMVVSGARGNWDQIRQLAGMRGLVADPKQRLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTRKGLTKRIFTT
TMVDGATVKEPSEILGTTVYGTTLARDAVDAEGTVVIAAGTDLGDAEIAAAIEAGIEEIT
VRSVLTCDSAVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAA
GAADITQGLPRVQELFEARTPKGEAAVAEAAGRLRIEDDADGKRLVITRDDGEEDLVVPV
SRRQRLLVTDGDHVEPGDALTEGPIDPKKVLRLRSVGATQRHLVEEVQEVYRSQGVDIHS
KHIEVIVRQMLRRVTVLESGDTMLLQGDLVDVMTFRAENRRVMAEGGKTASGRTELMGIT
KASLATDSWLSAASFQETTRVLTEAAMNGKSDPLLGLKENVILGKLIPAGTGLARYSDIE
VEPTEEVKQEVFSRTGLTDDMFGVGESVALDDFHFGGDFRADFSEDFRTGFSSEDYQF
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgctaacgtcttcgatcgcatccagctcggtctcgccaccgccgaggacatc
aagtcctggtcccacggtgaggtcaagaagcccgagaccatcaactaccgtaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtcccacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcgtctgcgagcgctgtggtgtc
gaggtcacccgctccaaggtgcgccgtgagcgcatggcccacatcaagctggccgcgccc
gtgacccacatctggtacttcaagggcgtgccctcccgtctgggctacctgctcaacctg
gcccccaaggacctggagaaggtcatctacttcgccgcctacatggtgaccgaggtggac
gaggagggccgccgcgacgaccttccctcgctacgcaacgagctcgaggtcaagaagaag
cacgtcgaggaggccggccaggccgacgtcgaggcccgtcagcgccgcctcgaggaggag
ctggcccagctcgaggccgagggggccgagcagtcccagcgtgaccgcctgcgcaaggtg
gccgagcgtgagatgggcgccctgcgccgcaagaacgcccgcaccctggagcacatggac
cgcgtgtgggaccgcttcgtgggtctcaaggtcggcgaccttgagggcgacgaggtcctg
taccgcgacatggtcgcggactacggcatctacttcaagggcgccatgggcgccgaggcg
atccaggcgcgcctgcgcaccttcgacctcgcggccgaggccgagaccctgtccgaggtc
gtcgccaacggcaccggccaacgcaagacccgcgccatcaagcgcctgaaggtcatcaac
gccttccgcatcacgggcacggccccggagtcgatggtcctggacaacatcccggtcatc
ccgccggacctgcgccccatggtccagctcgacggtggccgcttcgccaccagcgacctc
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctcatggacctg
ggcgcgccgacgatcatcgtcaacaacgagaagcgcatgctgcaggacgccgtcgacgcc
ctgttcgacaacggccgccgtggtcgccccgtcaccggcgtcggcaaccgtccgctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctgctgggcaag
cgcgtggactactcgggccgctcggtcatcgtcgtcggtccccagctcaagctgcaccag
tgcggtctgcccagccagatggccctggagctgttcaagcccttcgtcatgaagcgcctg
gtcgagctcaaggaggcccagaacgtcaaggccgccaagcgcatggttgagcgcgccaac
cccaaggtctgggacatcctggccgaggtcatccgcgagcaccccgtgctgctcaaccgc
gcccccacgctccaccgcctgggcatccaggccttcgagccccagctcattgagggcaag
gccatccagctgcaccccctggtctgcggcgccttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgggtgctgaggcgcaggccgaggcccgcatcctcatgctg
tcgagcaacaacattctcaagccttcggatggccgtccggtgaccatgccctcccaggac
atgatcatcggcacctaccacctcacccagacgccggacccgacggcccccgtcgaggtc
gacgccgagggcaacgaggtcgtgccgtccttctcctccttcgcggaggcggtcatggcg
cacgacttcggcaagctgcacgtcaacgccaccgtggacatccgcttcgaggagggcatc
accgcccccgagggctggaaggctcccgagggctggagcgagggcgacccgatcaccctg
cgcacctccctgggccgggccctgttcaacacggcgctgcccgagaccttcccctacgtc
aactacgtcgtggacaagaagaagctcggcaacatcgtcaacacgctggccgagggctac
ccgcgtgtggacgtcgcggcctccctcgacgcgctcaaggccaacggcttctactggtcc
acctggtccggcatcacggtggcctacgccgacgtcgtctccccggactccaagcccgcg
atcctcgcccgctacgaggccgaggctcaggagatcgaggaccagttcgaccttggtgcg
ctcaccgaggaggaccgctaccagtccctcatcgacatctggaccaaggcgaccaacgag
gttgctgaggccatgcgtgagaacttcccggcccgtaacgccgtctaccagatggtggtc
tccggtgcccgtggtaactgggaccagatccgccagctggccggcatgcgcggcctggtg
gccgaccccaagcagcgcctcatcgagcgtccgatcaagtcgaactaccgcgagggcctg
agcgttctggagtacttcatcgccacccacggcgcccgcaagggcctggcggacacggcg
ctgcgtaccgcggactcgggctacctcacgcgtcgtctggtggacgtctcccaggacgtc
atcgtccgcgaggaggactgcggtacccgcaagggcctgaccaagcggatcttcaccacc
acgatggtcgacggcgccacggtcaaggagcccagcgagatcctgggcaccaccgtctac
ggcacgacgctcgcgcgtgacgcggtcgacgccgagggcacggtcgtcatcgcggcgggc
acggaccttggcgacgccgagatcgccgccgccatcgaggcgggcatcgaggagatcacg
gtgcgctcggtgctcacctgcgactccgccgtcggaacctgcgccgcctgctacggccgc
tcgctggccaccggcaagcgtgtggacatcggtgaggccgtgggcatcatcgccgcgcag
tccatcggtgagcccggcacgcagctgacgatgcgtaccttccacacgggtggtgcggcc
ggtgcggcggacatcacccagggtctgccgcgtgtgcaggagctcttcgaggcccgtacc
cccaagggtgaggccgcggtggccgaggccgctggtcgcctcaggattgaggacgacgcc
gacggcaagcgcctggtcatcacgcgcgacgacggcgaggaggacctcgtggtcccggtc
tcgcgccgccagcgcctgctggtgaccgacggcgaccacgtggagccgggcgacgcgctc
accgagggtccgatcgaccccaagaaggtgctgcgcctgcgcagcgtgggtgccacccag
cgccacctcgtcgaggaggtccaggaggtctaccgctcccagggcgtggacatccactcc
aagcacatcgaggtcatcgtgcgccagatgctgcgtcgcgtcaccgtcctggagtcgggc
gacacgatgctgctgcagggcgacctcgtggacgtcatgaccttccgtgcggagaaccgt
cgcgtgatggccgagggcggtaagacggcttcgggccgtaccgagctcatgggtatcacc
aaggcctcgctggccacggactcctggctgagcgccgcctccttccaggagacgacgcgt
gtgctcaccgaggccgcgatgaacggcaagtcggacccgctgctgggcctgaaggagaac
gtcatcctcggcaagctcatccccgccggtacgggcctggcccgctactcggacatcgag
gtggagccgacggaggaggtcaagcaggaggtgttctcgcgcacgggcctgaccgatgac
atgttcggcgtcggcgagtcggtcgcgctggacgacttccacttcggtggggacttccgt
gcggacttctccgaggacttccgcacgggcttcagctcggaggactaccagttctga
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