Azospira restricta: IWH25_06005
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Entry
IWH25_06005 CDS
T07061
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ares
Azospira restricta
Pathway
ares03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ares00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IWH25_06005 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ares03021
]
IWH25_06005 (rpoC)
03400 DNA repair and recombination proteins [BR:
ares03400
]
IWH25_06005 (rpoC)
Enzymes [BR:
ares01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IWH25_06005 (rpoC)
Transcription machinery [BR:
ares03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IWH25_06005 (rpoC)
DNA repair and recombination proteins [BR:
ares03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IWH25_06005 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Peptidase_M23
PDZ
Motif
Other DBs
NCBI-ProteinID:
QRJ64893
UniProt:
A0A974Y4X1
LinkDB
All DBs
Position
1242397..1246605
Genome browser
AA seq
1402 aa
AA seq
DB search
MKALLDLFKQVTQEEEFDAITIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVCDPGMTPLNRAQLLTEDDYLAKVEEYGDDFQALM
GAEGIRELLRNLDLDSEVEKLRGELETTGSEAKNKKLAKRLKVLEGFQKSGIKPDWMILE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKQAKKMVESQEPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATRDRINGKGEGLYFADVGEVTRALAAR
EVDLHSRVSVRIKEYESDGNDGWNEKITRYQTTAGRALLSEILPKGLPFSVLDRPLKKKE
ISKLINTAFRRCGLKETVVFADKLMQNGYALATRAGISFCSDDMQVPAKKYEIIAEAEKE
VKEIETQYTNSLVTQGERYNKVVDIWGRTGDQVAKVMMEQLGHEEVIDRHGKKVKQDSFS
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTQNGATMKALIEGGEVIEALRERIL
GRVAVNDVVNPETDETVIEAGSLIDEDAVDLIDALGIDEVRVRTPLTCDTRYGLCAKCYG
RDLGRGSLVNTGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAVASQVETKSTGVVRF
TATMRYVTNAKDEKIVITRSGEVLITDDNGRERERHKVPYGATLQVGDGQQVKAGAKLAT
WDPHTRPIISEYGGMVKFENVEEGVTVAKQIDEVTGLSTLVVIDPKRGGKAQTKGLRPQV
KLLDANGDEVKVHGTDHAVAMTFQVGAIITVVDGQQVSVGDVLARLPQESAKTRDITGGL
PRVAELFEARTPKDAGLLAEFTGTVSFGKDTKGKQRLVITDLDGVTHEYLIPKDKHVLVH
DGQVVNKGESIVDGEPDPHDILRLQGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVNIVDPGDTRFIKSEQVERAEVLDENDRVTADGKIPATYEYVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHNTRRQQSAGDDIA
FDRPISDEEAVPTSEENLQANS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactgcttgatttgttcaaacaggtaacgcaggaagaggaattcgacgcgatc
accatcggtctcgcgtcgcccgagaagatccgttcctggtcctacggcgaggtcaagaag
ccggaaaccatcaactaccgcaccttcaagccggagcgcgacggcctgttctgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaaatgcggcgtcgaagtgacgctggccaaggtgcgccgtgag
cgcatgggccacatcgagctggccagcccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtcctcgacatgacgctgcgcgacatcgagcgcgtactctac
ttcgaagccttcgtcgtctgcgatccgggcatgaccccgctcaatcgcgcccagctgctg
accgaagacgattacctcgccaaggtcgaggagtacggtgacgacttccaggcgctgatg
ggcgccgaaggcatccgcgagctgctgcgcaacctcgatctcgacagcgaggtcgagaag
ctgcgcggcgaactcgagacgaccggctcggaagccaagaacaagaagctcgccaagcgc
ctgaaggtcctcgagggcttccagaagtccggcatcaagcccgactggatgatcctcgaa
gtgctgccggtgctgccgccggacctgcgcccgctggtgccgctggatggtggccgcttc
gcgacctccgatctgaacgacctctaccgtcgcgtcatcaaccgcaacaaccgtctgaag
cgcctgctcgagctgaaggcgccggacatcatcgtccgcaacgagaagcgcatgctgcag
gagtcggtcgactcgctgctcgacaacggccgtcgcggcaaggcgatgaccggcgccaac
aagcgtccgctgaagtcgctggccgacatgatcaagggcaagggcggccgcttccgtcag
aacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcag
ctgaagctgcaccagtgcggcctgccgaagctgatggcactcgagctgttcaagcccttc
atcttcaacaagctcgagctgatgggtctggcgaccacgatcaagcaggcgaagaagatg
gtcgagtcgcaggagccggtggtctgggacatcctcgaagaggtgatccgcgagcatccg
gtcatgctgaaccgtgcgccgacgctgcaccgtctggggatccaggccttcgagccgacg
ctgatcgaaggcaaggcgatccagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgtccacgtgccgctgtcgctcgaagcgcagatggaagcg
cgcacgctgatgctggcctcgaacaacgtgctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacatcgttctcggcctttactatgccacccgcgaccgcatcaacggc
aagggcgagggcctctatttcgccgacgtcggcgaagtgacgcgcgcgctggcggccagg
gaagtcgacctgcactcgcgcgtctcggtgcgcatcaaggaatacgaatcggacggcaac
gacggctggaacgagaagatcacccgctaccagacgaccgccggccgtgcgctgctctcc
gagatcctgcccaagggcctgcccttcagcgtcctcgaccggccgctgaagaagaaggaa
atctcgaagctgatcaacaccgccttccgccgctgcggcctgaaggaaaccgtcgtcttc
gccgacaagctgatgcagaacggctacgcgctggcgacccgcgccggcatctcgttctgt
tcggacgacatgcaggtgccggcgaagaagtacgagatcatcgccgaggcggagaaggaa
gttaaggagatcgagacccagtacaccaacagtctggtcacccagggcgagcgctacaac
aaggtcgtcgacatctggggccgtaccggcgaccaggtggcgaaggtcatgatggagcag
ctcggccacgaggaagtgatcgaccgccacggcaagaaggtcaagcaggactcgttcagc
tcgatcttcatgatggccgactccggcgcccgcggctcggcggcgcagatccgccagctg
gccggcatgcgcggcctgatggcgaagccggacggttcgatcatcgaaaccccgatcacg
accaacttccgcgaaggcctgaacgttctgcagtacttcatctcgacgcacggcgcccgc
aagggtctggccgacaccgcgctgaagaccgcgaactccggctatctgacgcgccgtctg
gtcgacgtgacgcaggatttggtggtcaccgaggacgattgcggcacccagaacggcgcc
acgatgaaggcgctgatcgagggcggcgaagtgatcgaggcgctgcgcgagcggatcctc
ggccgcgtcgcggtgaatgacgtggtcaacccggaaaccgacgagacggtgatcgaagcc
ggctcgctgatcgacgaggatgccgtcgacctgatcgacgcgctgggcatcgacgaagtg
cgagtgcgtactccgctcacctgcgacacccgctacggcctgtgcgccaagtgctacggc
cgcgacctcggccgcggcagcctggtcaacaccggcgaggcggtcggcgtcatcgccgcc
cagtcgatcggcgaaccgggcacgcagctgacgatgcgtaccttccacgtcggcggcgcg
gcatcgcgtgcggcggtggcctcgcaggtcgagaccaagagcaccggcgtcgtccgcttc
acggcgacgatgcgctatgtcaccaacgccaaggacgagaagatcgtcatcacccgttcc
ggcgaggtgctgatcaccgacgacaacggccgcgagcgcgagcgccacaaggtgccgtac
ggcgccacgctgcaggtgggcgacggccagcaggtcaaggccggcgccaagctggcgacc
tgggacccgcacacccgcccgatcatcagcgaatacggcggcatggtgaagttcgagaac
gtcgaggaaggcgtcaccgtcgccaagcagatcgacgaggtgaccggcctgtcgacgctg
gtcgtgatcgacccgaagcgcggcggcaaggcgcagaccaagggtctgcgtccgcaggtc
aagctgctcgacgccaacggcgacgaggtcaaggtgcacggcaccgaccacgcggtggcg
atgaccttccaggtcggcgccatcatcaccgtcgtcgacggccagcaggtctcggtcggc
gacgtgctcgcccgcctgccgcaggaatcggcaaagacccgcgacatcaccggcggtctg
ccgcgcgtcgccgagctgttcgaagcgcgtacgccgaaggatgccggcctgctcgccgag
ttcaccggcaccgtgtcgttcggcaaggacaccaagggcaagcagcgcctggtcatcacc
gacctcgacggcgtcacgcacgagtacctgatcccgaaggacaagcacgtgctggtgcac
gacggccaggtggtgaacaagggtgagtcgatcgtcgacggcgaaccggatccgcacgac
atcctgcgcctgcagggggtcgaggcgctggcccgctacatcaccgacgaagtgcaggac
gtctaccgtctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgtccgccag
atgctgcgccgcgtgaatatcgtcgatccgggcgacacccgtttcatcaagagcgagcag
gtcgagcgtgccgaagtgctggacgagaacgaccgcgtcaccgccgacggcaagattccg
gcgacctacgagtacgtgctgctcggcatcaccaaggcctcgctgtcgaccgactcgttc
atctcggccgcttccttccaggaaacgacccgcgtgctgaccgaggcggcgatcatgggc
aagcgcgacgaactgcgtggcttgaaggaaaacgtcatcgtcggccgcctgatcccggcg
ggtaccggcctggcctatcacaacacgcgccgccagcagtccgccggcgacgacatcgcc
ttcgaccgtccgatttcggacgaagaagcggtgccgacctccgaggaaaacctgcaggcg
aacagctga
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integrated database retrieval system
