Azospira restricta: IWH25_07560
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Entry
IWH25_07560 CDS
T07061
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ares
Azospira restricta
Brite
KEGG Orthology (KO) [BR:
ares00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ares03016
]
IWH25_07560
Enzymes [BR:
ares01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
IWH25_07560
Transfer RNA biogenesis [BR:
ares03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
IWH25_07560
Prokaryotic type
tRNA splicing ligases
IWH25_07560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QRJ65181
UniProt:
A0A974Y5B7
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All DBs
Position
1533071..1534279
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AA seq
402 aa
AA seq
DB search
MGILIELNKGRVPVKVWTRDIEPEAMQQLLNVASLPIVHGHVAAMPDVHLGIGATVGAVI
PTRQAIIPAAVGVDIGCGMNAVRTSLTARDLPDNLRRLRSAIEAAVPVGFDQHARSPMRG
AELQRIERELGGRLARIVGKHPELKKMQRRFDETWACQIGTLGGGNHFIELCLDEADRVW
IMLHSGSRGIGNVLGRYFIAAAQRDMQRHQLQLPDRDLAYFAEGSALFDDYVEAVEWAQD
YAFLNRSRMMAAIVEALKPLLPPFRLEAEAINCHHNYVAREEHFGERLFITRKGAISARA
GELGIIPGSMGARSYIVRGLGNPQSYCSCAHGAGRRMSRSAAKRRFGPRDLEAQTAGVEC
RKDAGVVDEIPAAYKDIDQVMDNQRDLVEVVHTLKQVLCVKG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggcattctgatcgagttgaacaaggggcgcgtcccggtcaaggtgtggacgcgcgac
atcgagccggaggcgatgcagcagctgctcaacgtcgcttcgctgccgatcgtgcacggc
cacgtcgcggcgatgccggacgtgcatctgggcatcggcgccaccgtcggcgcggtcatc
ccgacccggcaggcgatcatcccggccgccgtcggcgtcgacatcggctgcggcatgaac
gccgtgcgcacctcgctcaccgcccgcgacctgccggacaacctgcgccggctgcgctcg
gcgatcgaggcggcggtgccggtcggcttcgaccagcacgcgcggagcccgatgcgcggc
gccgaactgcagcgcatcgagcgcgaactgggcgggcggctggcccgcatcgtcggcaag
catcccgagctgaagaagatgcagcgccgcttcgacgagacctgggcctgccagatcggc
acgctcggcggcggcaaccacttcatcgagctgtgcctggacgaggccgaccgcgtctgg
atcatgctgcactcgggttcgcgcggcatcggcaacgtgctcggccgctacttcatcgcc
gctgcgcagcgggacatgcagcgccaccagctgcagctgccggaccgcgacctcgcctat
ttcgccgagggttcggccctcttcgacgactacgtcgaggcggtcgagtgggcgcaggac
tacgccttcctcaaccgcagccggatgatggcggcgatcgtcgaggcgctgaagccgctg
ctgccgccgttccggctggaggccgaggcgatcaactgccaccacaactacgtcgcgcgc
gaggagcatttcggcgagcgcctgttcatcacgcgcaagggcgcgatctcggcgcgcgcc
ggcgagctggggatcatcccgggcagcatgggcgcccggtcgtacatcgtgcgcggtctg
ggcaacccgcagtcctactgctcgtgcgcgcacggcgccgggcggcggatgagccgcagc
gccgccaagcgccgcttcggcccgcgcgacctggaggcgcagaccgccggcgtcgagtgc
cgcaaggacgccggcgtggtcgacgagattccggcggcgtacaaggacatcgaccaggtg
atggacaaccagcgcgacctggtcgaggtcgtgcacacgctgaagcaggtgctgtgcgtg
aagggatga
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