Azospira restricta: IWH25_08030
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Entry
IWH25_08030 CDS
T07061
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ares
Azospira restricta
Pathway
ares03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ares00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IWH25_08030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ares03019
]
IWH25_08030
Enzymes [BR:
ares01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IWH25_08030
Messenger RNA biogenesis [BR:
ares03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IWH25_08030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
P-loop_SecA
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QRJ65267
UniProt:
A0A974SRY3
LinkDB
All DBs
Position
complement(1642069..1643523)
Genome browser
AA seq
484 aa
AA seq
DB search
MRFDELGLAPEILRAIADQGYTEPTPIQQKAIPLVMAGKDIMGGAQTGTGKTAAFTLPLL
QRLLPLASPSPSPARHPVRALILAPTRELAIQVHENLQSYAKYTAFRTLCVYGGVDIKPQ
IEAIRKGVEFLVATPGRLLDLVEQKCLNFQSVQALVLDEADRMLDMGFIPDVTRIINLLP
KETRQSLLFSATFSNEIKKLADTMLKSPELVEVAKRNTVSETITHRVHPVSAEAKRALLT
KLLKSDEYDQVLVFTRTKQETGKLARELAKSGIAADAIHGDKSQSERLKALEAFKDGTVK
VLVATDVAARGLDIDELPHVINFELPHTPEDYVHRIGRTGRAGRKGTAVSLVSADEVQYL
VDIEKLIKLQVEQVVIPGFAPEYDYEYPPTGRKKHHRRPEAGAPVVAPVAAPRREPREAR
EPRAPRHAKRNVAPDGFDFSAPYVEKELEPRGEVPQDDKPHAKPDPHKPKRPVAALLGGL
GKRA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgacgagctcggccttgcgcccgaaatcctccgcgccatcgccgaccagggt
tacaccgagccgacgccgatccagcagaaggccattccgttggtgatggccggcaaggac
atcatgggcggcgcccagaccggtaccggcaagaccgccgcgttcacgctgccgctcttg
cagcgcctgctgccgctggccagcccgagcccgtcgccggcgcgccacccggtgcgcgcg
ctgatcctggcgccgacgcgcgaactggcgatccaggtgcacgagaacctgcagtcctac
gccaaatacaccgcgttccgcacgctgtgcgtctatggcggcgtcgacatcaagccgcag
atcgaggcgatccggaagggcgtcgagttcctcgtcgccaccccgggccggctgctcgac
ctggtcgagcagaagtgcctgaacttccagagcgtgcaggcgctggtgctcgacgaagcc
gaccgcatgctcgacatgggcttcatccccgacgtcacgcgcatcatcaacctgctgccg
aaggagacgcggcagagcctgctcttctcggcgaccttctcgaacgagatcaagaagctc
gccgacacgatgctgaagtcgccggaactggtcgaagtggcgaagcgcaacaccgtctcc
gagacgatcacccaccgcgtgcacccggtgtcggccgaggccaagcgggcgctgctgacc
aagctcctgaagtcggacgaatacgaccaggtgctggtgttcacgcgcaccaagcaggag
accggcaagctcgcgcgcgagctggcgaagtcgggcatcgccgccgatgcgatccacggc
gacaagtcgcaatcggagcggctgaaggcgctggaagcgttcaaggacggcacggtcaag
gtgctcgtcgccaccgacgtcgccgcgcgcggcctcgacatcgacgaactgccgcacgtg
atcaacttcgagctgccgcacacgcccgaggactacgtgcaccgcatcggccgcaccggc
cgcgccggcaggaagggcaccgcggtgtcgctggtctcggccgacgaggtgcagtacctg
gtcgacatcgagaagctgatcaagctgcaggtcgagcaggtggtgatccccggcttcgcg
ccggagtacgactacgagtacccgccgaccggcaggaagaagcaccatcgccggccggag
gcgggtgcgccggtcgtggcgccggtggcggcaccgcgccgcgaaccgcgcgaagcccgc
gaaccgcgcgcgccgcgccatgcgaagcgcaacgtggcgccggacggcttcgacttcagc
gcgccctacgtggagaaggagctggagccgcgcggcgaagtgccgcaggacgacaagccg
cacgccaagcccgacccgcacaagccgaaacggccggtcgccgcgctgctcggcggcctc
ggcaagcgcgcctga
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