Azospira restricta: IWH25_13745
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Entry
IWH25_13745 CDS
T07061
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ares
Azospira restricta
Pathway
ares03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ares00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IWH25_13745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ares03019
]
IWH25_13745
03009 Ribosome biogenesis [BR:
ares03009
]
IWH25_13745
Enzymes [BR:
ares01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
IWH25_13745
Messenger RNA biogenesis [BR:
ares03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IWH25_13745
Ribosome biogenesis [BR:
ares03009
]
Prokaryotic type
rRNA processing factors
IWH25_13745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
QRJ62821
UniProt:
A0A974PWY3
LinkDB
All DBs
Position
2837454..2840225
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AA seq
923 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQKLIDLDIESASKEQRKSNIYKGVITRVEPSLEAAFVNY
GEERHGFLPFKEISRAYFQGNVEPSKARIQDVIKEGQELIVQVEKDERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRVEGEERNELREIMDQLQVPSGMSLIARTAAIGRSAEELQ
WDLNYLLQLWSAIEGAAGQQSGPFLIYLEGSLVIRAIRDYFQPDIGEILIDTDDVFEQAR
AFMGTVMPGNINRVKRYRDDVPLFSRFQIEHQIESAYSRQVNLPSGGAVVIDHTEALVAC
DVNSGRATRGADIEETAFKTNCEAADEIARQLRLRDLGGLIVIDFIDMESSKNQREVENR
LRDALRHDRARVQMGKISRFGLMELSRQRLRPALAETSYITCPRCTGTGHIRSTESAALH
ILRILEEEAMKDNTAAVHTQVPVDVATFLLNEKRPDIAAIELRHKVTILLIPNKHLETPQ
HTIVRLRHDDLNQEDLNQPSYKMVEAPAEELKTGSAQAEGRQPRQEAAIKHITPEQPAPV
SEEKPAEPAKPAAAPAPETGIIAKIFSWFRGNKAPAETAPEPAKKTEERRSGANRERGRD
DKREGQRDGGRRGRGNRSSRSEDEREGREGREAREARPPREPKEGRQQGAPREEGQQAQR
EPREPRRQREPREPREPRAERNKEAQQAAATESKLAAQAGADAAPTPEVAGDEEGRGRRR
GRRGGRRERGEGRPEAQAGADAATVAATLEGEALAAAPAAEAPTLEAAAPTPPAVQEAVA
VAPAAEAAVETITAPAVAVVAEPPAVETPAPATSPVSAPEAAATPEAEAPAEAEAPAEAV
VAAPPEPPVAAEPIAVSAQASEPAADIGAALESSGLVMVETSQDKARAWVPEVAPTPVQP
RRRRPAPVVTSDEPMVMVETRDK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctcttcaatgcgacacaagccgaggaactccgtgtcgccattgtcgac
ggtcagaaactgatcgatctcgacattgaatcggcctcgaaggaacaacgcaaaagcaac
atctacaagggtgtcatcacccgcgtggaacccagcctggaagcggctttcgtcaattac
ggcgaagagcgccacggcttcctgccgttcaaggaaatctcccgcgcctacttccagggc
aatgtcgagccgtccaaggcgcgcatccaggacgtcatcaaggaaggccaggagctgatc
gtccaggtcgagaaggacgagcgcggcaacaagggtgccgcgctgacgaccttcatcagc
ctcgccggccgctatctggtgctgatgccgaacaacccgcgcggcggcggcgtctcgcgc
cgcgtcgagggcgaggagcgcaacgagctgcgcgagatcatggaccagctgcaggtgccg
tcggggatgagcctgatcgcgcgcaccgcggcgatcggccgcagcgccgaggaactgcag
tgggacctcaactacctgctgcagctgtggagcgcgatcgagggcgccgccggccagcag
tccggccccttcctgatctacctggaaggcagcctggtcatccgcgccatccgcgactac
tttcagccggacatcggcgagatcctgatcgacaccgacgatgtcttcgagcaggcccgc
gccttcatgggcacggtaatgccgggcaacatcaaccgcgtcaagcgctaccgcgacgac
gtgccgctgttctcgcgcttccagatcgaacaccagatcgagtcggcctactcgcgccag
gtcaacctgccgtcgggcggtgccgtcgtcatcgaccacaccgaggcgctcgtcgcctgc
gacgtcaactccggccgcgcgacgcgcggcgccgacatcgaggaaaccgcgttcaagacc
aactgcgaagcggccgacgagatcgcccgccagctgcgcctgcgcgacctcggcggcctg
atcgtgatcgacttcatcgacatggagagcagcaagaaccagcgcgaggtcgagaaccgc
ctgcgcgacgcgctgcgccacgaccgcgcccgcgtgcagatgggcaagatcagccgcttt
ggcctgatggaactgtcgcgccagcgcctgcgcccggcgctcgccgagaccagctacatc
acctgcccgcgctgcaccggtaccggccatatccgctcgaccgaatcggccgcgctgcac
atcctgcgcatcctcgaagaggaagcgatgaaggacaacaccgccgccgtgcacacgcag
gtgccggtcgacgtcgccaccttcctgctcaacgagaagcgcccggacatcgcggcgatc
gagctgcggcacaaggtcaccatcctgctgatcccgaacaagcacctcgagacgccgcag
cacaccatcgtccgcctgcgccatgacgacctcaaccaggaagacctgaaccagccgtcg
tacaagatggtcgaggctccggcggaagagctgaagaccggcagcgcccaggcggaaggc
cgtcagccgcgccaggaagcggcgatcaagcacatcacgccggagcagccggcaccggtc
agcgaagagaagccggccgagccggccaagcccgcagccgccccggcaccggagaccggc
atcatcgccaagattttctcgtggttccgcggcaacaaggcgccggccgaaacggcaccg
gaaccggccaagaaaaccgaggagcgccgctccggcgcgaaccgcgaacgcggccgtgac
gacaagcgcgaaggtcagcgcgacggcggacgccgtggccgcggcaaccgcagcagccgc
agcgaggacgagcgcgagggtcgcgagggtcgggaagcccgcgaagcgcgcccgccgcgc
gagccgaaggaaggccgccagcagggcgccccgcgcgaggaaggtcagcaggcgcagcgc
gagccgcgcgaaccccgtcgtcagcgcgaaccgcgtgaaccgcgcgagccgcgtgcggaa
cgcaacaaggaagcccagcaggctgccgccaccgaaagcaagctagccgcccaggccggt
gccgatgccgcgccgaccccggaggtcgccggcgacgaggaaggccgtggccgccgtcgc
ggtcgccgcggcggccgccgcgagcgcggcgaaggccgtccggaagcgcaagccggcgcc
gacgcggcgaccgtggcggcaacgctcgagggcgaggccctggcggccgccccggccgcc
gaagccccgaccctagaggctgccgcgccgacgcctccggccgtgcaggaagcggtcgcg
gtcgcgccggccgccgaagcggcggttgaaacgatcaccgcgccggcggtcgccgtcgtc
gccgagccgccggctgtggagacgccggcaccggcgacctctcccgtcagtgcgcccgaa
gcggccgcaacgcccgaagcggaagcgcctgccgaagcggaagcgcctgccgaagccgtc
gtcgccgccccgcccgagccgccggtcgccgccgaaccgatcgccgtttccgcgcaggcc
tccgaaccggcagccgacatcggcgccgccctcgaatcgtcggggctggtgatggtcgaa
accagtcaggacaaggcgcgcgcgtgggttccggaagtcgcgccgacgcccgtccagccg
cgccgccgccgacccgctccggtcgtcaccagcgacgagccgatggtcatggtcgagacc
cgcgacaagtaa
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