Actinacidiphila reveromycinica: RVR_1935
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Entry
RVR_1935 CDS
T10579
Name
(GenBank) putative ABC transporter solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
arev Actinacidiphila reveromycinica
Pathway
arev02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RVR_1935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arev02000
]
RVR_1935
Transporters [BR:
arev02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RVR_1935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
RIO1
Pkinase_fungal
Seadorna_VP7
Motif
Other DBs
NCBI-ProteinID:
BBA96579
UniProt:
A0A7U3VMH7
LinkDB
All DBs
Position
complement(1619265..1622444)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSDGLFAGRYELAELLGSGGMARVHRARDTRMGRIVAIKTLMPELALDPDARRRFAREAH
AAGALNHPGIVTVHDQDEYRDGDTVVPYLVMEYVRGGTLSELVREQAPFEPERAVRIVCD
ILDALAHAHSHGTVHRDVKPANVMVTEEGAVKVADFGIARVLDTDTRLTTAGSSVGTPSY
MSPEQINGRDVDARSDIYAVGCVLTELLTGKPPFHDGSALSLMYWHVHSAPPAPSTRNPR
VSAELDALVMAALAKSPDDRPADAGVYRARLWAWLTAARSATLSGPATLPPSDFGLAKPA
PRPAAAPAPGSTPAPAPGSAPGSASARPSAQPSPPAPPAGADPRATFGVGGALPSLPAQG
PPAQPIPGPYPAGAGTPAGAGTPAAAPLEHPAYSRSPQVPLPPPYQPSTPPPVNNGTPPL
HRPAVRQGPPAGPAAGVGLPSDTPPAPTPGWSARRKVLTGVAGLAVAGITVSVVLATGAL
GGDKPDPGPDPHPPTSAPVDQQAALQRHGGKAGTGFNGGNNGVVRPSTQTGGTVHLATSN
FPDALLDPADTYDPSAWNIQRLLYRSLVSYAPAPGDKGRQLVPDLATTTGGVSDDGLTWT
FHLKKGLRFQDGSAITSKDVKYGIERTFDQDVHPSGSTYLSDLLDEGQHYPGPYDDSDPG
RMGLKSVATPDDGTVVFTLAKPYADFPYILAMADGAVVPPSADTGGGKDYEEHPVASGPY
KVSAYVPGKSLQLVRNTEWKASTDQVRSQLPTGYQLKLYDSQQAVEQAVLDGSADLDFTQ
SLLDDDTETKVINDPSRKADADLAYTGATRYLSLSTDQAPFDDVLCRRAVAYAVDREQVQ
AALGGQYEGGDIATTMLPPTNISHDPKANMYSSTTGEAEEQYARTELTACGKPDGFSTTL
VGVAGASKGQQAMEAIATALAKVGIKVTVKTMDAGAFYDTLLSPTKLKAAKWGMVYTGWV
GDYPTGGGFLRQLVAPGSESNYAALDDSTLNSMIDQADTLTSPSAAKTAWTKIDAQVLSD
AATVPIVYDRHLVYRGPRLTNVYQQQVLGEIDLTALGVK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgggcttttcgcgggcagatacgaactcgcggagctgctcggctccggcggg
atggcccgggtgcaccgtgcccgggacacccggatgggccggatcgtggccatcaagacc
ctgatgccggaactggcgctggaccccgacgcccgccgcaggttcgcccgcgaggcgcac
gcggccggcgcgctgaaccaccccggcatcgtcaccgtccacgaccaggacgagtaccgg
gacggcgacaccgtggtgccgtacctcgtcatggagtacgtccgcggtggcacgctctcc
gaactcgtgcgcgagcaggccccgttcgagcccgagcgggcggtgcggatcgtctgcgac
atcctcgacgcgctcgcccacgcgcacagccacggcaccgtgcaccgcgacgtgaagccg
gccaacgtgatggtcaccgaggaaggcgcggtcaaggtcgccgacttcggcatcgcccgc
gtgctggacaccgacacccggctgaccaccgccggctcctcggtcggcacccccagctac
atgtcgcccgagcagatcaacggccgtgacgtggacgcccgcagcgacatctacgccgtc
ggctgcgtgctcaccgaactgctcaccggcaagccgccgttccacgacggcagcgcgctg
agcctgatgtactggcacgtccactccgcgccgcccgcgccctccacccgcaacccgcgg
gtgtccgcggagctcgacgccctggtgatggccgcgctcgcgaagtcgcccgacgaccgc
cccgccgacgccggcgtctaccgggcgcggctgtgggcctggctgaccgccgcccgctcc
gccaccctgagcgggccggccacgctgcccccgagcgacttcggtctggcgaagcccgcc
ccgaggccggccgccgcccccgcgcccgggtccacccccgcgcccgcgccggggtccgcg
cccggctccgcgtccgcccgcccgtcggcccagccgtccccgccggcgccccccgccggc
gccgacccgcgcgccaccttcggagtcggcggcgccctgccctcgctccccgcccagggc
ccgcccgcgcagccgatacccgggccgtacccggcgggcgcgggtaccccggcgggcgcc
ggcaccccggctgccgcgccgctcgaacaccccgcctactcccgcagcccgcaggtgccg
ttgcccccgccgtaccagccgagcaccccgccgccggtgaacaacggaaccccgccgctg
caccggcccgccgtgcggcagggcccgccggccggccccgccgcgggcgtcggcctgccg
tccgacacaccgcccgcccccacacccgggtggagcgcgcgccgcaaggtcctgaccggg
gtggccgggctcgccgtcgccggcatcaccgtctcggtcgtcctggccaccggcgccctc
ggcggcgacaagccggacccggggcccgacccgcacccgccgacgtccgcgccggtggac
cagcaggccgccctccagcgccacggcggcaaggcgggcacggggttcaacggcggcaac
aacggcgtcgtgcgcccgtccacgcagaccggcggcaccgtccacctggccacctcgaac
ttccccgacgccctgctggacccggccgacacctacgaccccagcgcctggaacatccag
cggctgctctaccgcagcctggtcagctacgcgcccgcgcccggcgacaagggccgccag
ttggtgccggacctggccaccaccaccggcggcgtcagtgacgacggcctgacctggacc
ttccacctcaagaagggcctgcgcttccaggacggctcggcgatcacctccaaggacgtc
aagtacggcatcgagcgcaccttcgaccaggacgtccaccccagcggctcgacctacctg
tccgacctcctcgacgaggggcagcactacccgggcccctacgacgacagcgaccccggc
cggatggggctgaagtcggtcgccacccccgacgacggcaccgtcgtcttcacgctcgcc
aagccctacgcggacttcccgtacatcctcgccatggccgacggggccgtggtgccgccg
agcgccgacaccggcggcggcaaggactacgaggagcacccggtggccagcggcccgtac
aaggtgtccgcgtacgtccccggcaagtcgctccaactggtgcgcaacaccgagtggaag
gccagcaccgaccaggtgcgctcccaactgcccaccgggtaccagttgaagctctacgac
tcgcagcaggccgtcgagcaggcggtgctcgacggcagcgccgacctggacttcacccag
tcgctgctcgacgacgacaccgagacgaaggtcatcaacgacccgtccaggaaggccgac
gcggacctcgcctacaccggcgccacccgctatctgagcctgagcaccgaccaggcgccc
ttcgacgacgtcctgtgccgccgggccgtcgcctacgcggtggaccgcgagcaggtgcag
gccgcgctcggcgggcagtacgaaggcggcgacatcgccaccaccatgctgccgcccacc
aacatcagccacgaccccaaggccaacatgtactcctccaccaccggggaggccgaggag
cagtacgccaggaccgaactgaccgcgtgcggaaagccggacggcttcagcaccaccctg
gtcggtgtcgcgggcgcgtccaagggccagcaggccatggaggcgatcgccacggcgctg
gcgaaggtcggcatcaaggtcaccgtcaagaccatggacgccggcgcgttctacgacacg
ctgctgtcgcccacgaagctcaaggctgccaagtggggcatggtgtacaccggttgggtc
ggcgactacccgaccgggggcggcttcctgcggcaactcgtcgcccccggctccgagtcc
aactacgcggccctcgacgacagcaccctcaacagcatgatcgaccaggccgacacgctc
accagcccgtcggcggcgaagacggcgtggaccaagatcgacgcccaggtgctgtccgac
gccgcgacggtgccgatcgtctacgaccgccacctggtctaccgcgggccgcggctgacc
aacgtctaccagcagcaggtgctcggcgagatcgacctcaccgcgctgggcgtgaagtga
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