Actinacidiphila reveromycinica: RVR_2198
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Entry
RVR_2198 CDS
T10579
Name
(GenBank) putative DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arev Actinacidiphila reveromycinica
Pathway
arev03030
DNA replication
arev03430
Mismatch repair
arev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RVR_2198
03430 Mismatch repair
RVR_2198
03440 Homologous recombination
RVR_2198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arev03032
]
RVR_2198
03400 DNA repair and recombination proteins [BR:
arev03400
]
RVR_2198
Enzymes [BR:
arev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RVR_2198
DNA replication proteins [BR:
arev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RVR_2198
DNA repair and recombination proteins [BR:
arev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RVR_2198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBA96750
UniProt:
A0A7U3UM56
LinkDB
All DBs
Position
complement(1851180..1854743)
Genome browser
AA seq
1187 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAQRLKPMFTEVARQGMPAIAMSDHGNMFGAYEFQQVAKGFD
SVKPIIGIEAYVAPSHRRYKKQEFWGPGGQRAMSDDGEGSKDVSGGGRFTHMTMWARNVE
GLRNLFYLSTEASYTGQFPAGKPRMDMELISEHAGGIIGTTGCPSGAIQTRLRLNQYDEA
KKVAASYQDILGKENYFLELMDHGLDLERNVRGDLLRLAKELDIPLLATNDAHYVLEEHA
DAHDNLLCIGVGKNKDDPNRFKFNGTGYYLKTAQQMRELFRELPEACDNTLLIAERIEAY
DEVFDLEDEMPQYPDVPEGETQESWLRQEVLKGLAMRYGDPIPAEVLERFETEMKVIGPM
GFSSYFLVVADICRHARDNKIPVGPGRGSATGSIVAYATRITELCPLEHGLLFERFLNPE
RINPPDVDLDFDDRKRDQMVAYVVEKYGDEYTALVNTFGKLKAKNAIKDTSRILGYPFAH
GERITKALPADVMGKSIPIDGVFNPEHPRYGEAGEIRALYQNEPDVQKVVDSAKGVEGLI
RNTGVHAAAVILSKTKLTNRIPLHMRKDGTKITGFDYPSCESMGLVKMDFLGLRNLGVID
QAIQNVRENRGVDLSTENIPLDDKNTYALLARGDTFGVFQLDGGGMRTLLKAMEPSRFED
IAAALALYRPGPMAANAHMNYASRKTGRQAVEPIHPELKDALEPILGNTFHLLIYQEQIM
AIARQLAGYTLGGADLLRRAMGKKKPEVLAAEWEKFHGGMQTNGYSEESIKALWDVMLPF
SGYAFNKSHTAGYGLVSFWTAYLKANYPAEYMAALLTSVGDDKDKAAIYLADARKSGVNV
LAPDVNASVAEFTAVGEDVRFGLKSVRNVGEGVIEALIAARKSKGLFTSFADFLDKVSIP
VLNKRAIESLIKAGAFDSLGHTRMGLSAVFEDAVDAIVPVKKAEAYGQDDLFASLGGPGQ
DTPTFGLDFAIPETEWPRKQLLAIERDMLGLYVSAHPLDGTEHILARNRDTTLAELLASG
QERPVKVAGLITGVDRKMTKQGNAWAAVTFADRDASIEVCFFPATYQLVGHALIPDSVVS
ISGRAQDRDGTMNIIGSELAELDVSSAESGGKPPVQLAFREHRILRHDAINELRRILSSH
PGESPVRARVAGPQKTTVYELGFLVDPTTVASEIKVSFGAEVWLGVA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacagctttgttcacctgcacaaccacaccgagtactcgatgctcgacggcgcg
cagcgcctgaagccgatgttcaccgaggtcgcgcggcaggggatgcccgcgatcgccatg
agcgaccacggcaacatgttcggggcctacgagttccagcaggtcgccaagggcttcgac
tcggtgaagccgatcatcggcatcgaggcgtacgtggcgccctcgcaccgccggtacaag
aagcaggagttctggggcccgggcggccagcgggcgatgtcggacgacggcgaggggagc
aaggacgtctccggcggcggccgcttcacccacatgacgatgtgggcgcggaacgtcgag
ggcctgcgcaacctgttctacctgtcgacggaggccagctacaccgggcagttccccgcg
ggcaagccgcggatggacatggagctgatctccgagcacgcgggcggcatcatcggcacc
accgggtgcccgtcgggcgccatccagacccggctccggctgaaccagtacgacgaggcg
aagaaggtcgcggcctcctaccaggacatcctcggcaaggagaactacttcctggagctg
atggaccacggcctggacctggagcgcaacgtccggggcgacctgctgcggctggcgaag
gaactggacatcccgctgctggcgaccaacgacgcgcactacgtgctggaggagcacgcc
gacgcgcacgacaacctgctgtgcatcggcgtcggcaagaacaaggacgacccgaaccgc
ttcaagttcaacggcaccggctactacctcaagaccgcgcagcagatgcgggagctgttc
cgggaactgccggaggcatgcgacaacacgctgctgatcgcggagcgcatcgaggcgtac
gacgaggtcttcgacctcgaggacgagatgccgcagtatccggacgtccccgagggcgag
acgcaggagtcgtggctgcgccaggaggtcctcaagggcctggcgatgcgctacggcgac
ccgatcccggcggaggtgctggagcgcttcgagaccgagatgaaggtcatcggtccgatg
ggcttctcctcctacttcctcgtggtcgcggacatctgccggcacgcgcgggacaacaag
atcccggtcgggccgggccgtggttcggcgaccggctcgatcgtggcctacgcgacccgg
atcaccgagctgtgcccgctggagcacggtctgctcttcgagcggttcctcaaccccgag
cgcatcaacccgccggacgtcgacctcgacttcgacgaccgcaagcgggaccagatggtc
gcctacgtggtggagaagtacggcgacgagtacaccgcgctggtgaacaccttcggcaag
ctgaaggcgaagaacgcgatcaaggacacctcgcggatcctcggctaccccttcgcgcac
ggcgagcggatcaccaaggcgctgccggccgacgtgatgggcaagagcatcccgatcgac
ggcgtcttcaaccccgagcacccgcgctacggcgaggccggcgagatccgggcgctgtac
cagaacgagcccgacgtccagaaggtcgtggacagcgccaagggcgtcgaggggctgatc
cgcaacaccggtgtgcacgcggccgcggtcatcctgtcgaagaccaagctgaccaaccgc
atcccgctgcacatgcgcaaggacggcacgaagatcaccgggttcgactacccgtcgtgc
gagtccatgggcctggtcaagatggacttcctgggcctgcgcaacctcggcgtgatcgac
caggcgatccagaacgtgcgggagaaccgcggtgtcgacctgagcaccgagaacatcccg
ctggacgacaagaacacctacgcgctgctggcccgcggtgacaccttcggcgtgttccaa
ctcgacggcggcggcatgcggaccctgctcaaggcgatggagccgagccggttcgaggac
atcgcggcggccctggcgctgtaccggccgggtccgatggcggccaacgcgcacatgaac
tacgccagccgcaagaccggccggcaggccgtcgagccgatccacccggagctgaaggac
gccctggagccgatcctcggcaacaccttccacctgctgatctaccaggagcagatcatg
gccatcgcccgccagttggcgggctacaccctcggcggcgccgacctgctgcgccgcgcg
atgggcaagaagaagccggaggtgctggcggccgagtgggagaagttccacggcggcatg
cagaccaacgggtactccgaggagtccatcaaggccctctgggacgtcatgctcccgttc
tccgggtacgcgttcaacaagtcccacaccgccggctacggactggtgtccttctggacc
gcctacctcaaggcgaactacccggccgagtacatggcggccctgctcacctcggtcggg
gacgacaaggacaaggcggccatctacctcgccgacgcccgcaagagcggcgtcaacgtg
ctggcgcccgacgtgaacgcgtcggtcgccgagttcaccgccgtcggcgaggacgtccgg
ttcggcctgaagtcggtgcggaacgtgggcgagggcgtcatcgaggcgctgatcgccgcg
cgcaagtcgaagggcctgttcacctcgttcgccgacttcctggacaaggtgagcatcccg
gtcctgaacaagcgggccatcgagtcgctgatcaaggcgggcgcgttcgactcgctcggc
cacacgcggatgggcctgtccgccgtcttcgaggacgcggtcgacgccatcgtcccggtg
aagaaggccgaggcgtacggccaggacgacctgttcgcgagcctgggcgggcccggccag
gacacgccgaccttcgggctggacttcgcgatccccgagaccgagtggccgcgcaagcaa
ctgctggccatcgagcgggacatgctgggcctgtacgtctcggcgcacccgctggacggc
accgagcacatcctcgcccgcaaccgcgacaccacgctcgccgaactgctggcgtccggc
caggagcggccggtgaaggtcgccgggctcatcaccggtgtcgaccgcaagatgaccaag
cagggcaacgcctgggccgcggtcacgttcgccgaccgcgacgcgagcatcgaggtctgc
ttcttccccgcgacctaccagctcgtgggacacgccctcatccccgacagcgtcgtctcc
atcagcggtcgggcgcaggaccgcgacggcacgatgaacatcatcggctcggaactggcg
gagctggacgtgtcctcggcggagagcggcgggaagcccccggtgcagctcgccttccgc
gagcaccggatcctgcgccacgacgccatcaacgagctgcgccgcatcctgtcctcgcac
cccggtgagagcccggtgcgcgcacgcgtcgccggaccgcagaagaccaccgtctacgaa
ctggggttcctcgtcgatcccaccacggtggcctcggagatcaaggtctccttcggcgcg
gaggtctggctcggcgtggcctga
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