Actinacidiphila reveromycinica: RVR_3744
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Entry
RVR_3744 CDS
T10579
Name
(GenBank) putative ADA-like regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
arev Actinacidiphila reveromycinica
Pathway
arev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RVR_3744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arev03000
]
RVR_3744
03400 DNA repair and recombination proteins [BR:
arev03400
]
RVR_3744
Enzymes [BR:
arev01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RVR_3744
Transcription factors [BR:
arev03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RVR_3744
DNA repair and recombination proteins [BR:
arev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RVR_3744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
McpB_HAMP_1st
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BBA97815
UniProt:
A0A7U3UP62
LinkDB
All DBs
Position
3239689..3241236
Genome browser
AA seq
515 aa
AA seq
DB search
MHTDFDACVRAVQSKDSRFDGWFFTAVLTTRIYCRPSCPAMSPKAENMTFYPSAAAAQQA
GFRACKRCRPDASPGSPQWNERADLVARAMRLIGDGVVDREGVPGLASRLGYSPRQVERQ
LLAELGAGPLALARAQRAQTARLLIETTAMPMSEVAFAAGFASIRTFNETVREVFALAPG
ELRARVAKGRPAATAGSIALRLPFRRPLTPDNLFGHLAATAVPGVEEWRDGAYRRTLRLP
HGPGTVSLRPLPDHIACLLSLTDWRDLGQAISRCRRLLDLDADPLAVDALLSCDPLLAPL
VAKAPGRRVPRVADGPEFAVRAVLGQQISTSAARTHAGRLVAAYGEPVADPGGGLTHLFP
APETLIEHAPASLAMPQTRKDTLAALLRALVSGELDLDVGSDWQHARALLAALPGFGPWT
VETIAMRALGDPDAFLPTDLGVRYAARDLGLPTTPAALTRHAAAWQPWRAYATQYLWATG
DHPINALPQDERTTMTLPADPSASHLVPATEGTAP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgcatacggacttcgacgcctgcgtccgcgccgtgcagtcgaaggactcccgtttcgac
gggtggttcttcaccgcggtgctgaccacacgcatctactgccggccgagttgccccgcc
atgtcgccgaaggccgagaacatgaccttctacccgagcgcggcggccgctcagcaagcc
gggttccgcgcctgcaagcggtgccgcccggacgccagccccggctcgccccagtggaac
gagcgggccgacctcgtcgcccgcgccatgcggctgatcggcgacggcgtcgtcgaccgg
gaaggcgtgccgggcctcgcgtcccgcctcggctacagcccgcgccaggtggagcgccaa
ctgctcgcggagctgggggcgggccccttggcgctggccagggcccagcgggcacagacc
gcacggctgctcatcgagaccacggccatgccgatgagcgaggtggccttcgcagccggc
ttcgccagcatccgcaccttcaacgaaaccgtccgggaggtgttcgcgctggctcccggc
gagctgcgcgcgagggtcgccaagggccgtccggcggccaccgccggctcgatcgcgctg
aggctgcccttccgtcgaccgctgactccggacaacctcttcggccacctggcggcgacc
gccgtcccgggcgtcgaggagtggcgggacggcgcgtaccggcgcaccctgcgactgccg
cacggccccggcacggtctcgctgcggccactgcccgaccacatcgcctgcctgctgtcg
ctcaccgactggcgggacctgggacaggcgatcagccgctgccgtcgcctgctcgacctg
gacgccgacccgctcgccgtcgacgcgctcctgtcctgcgacccgctgctcgcccccctg
gtcgccaaggcgccgggacgcagggtgccgcgcgtcgccgacggaccggagttcgccgtg
cgcgcggtactcgggcagcagatctcgacatcggccgcgcgtacccacgcggggcgcctg
gtggccgcgtacggggagcccgtcgccgaccccggcggcggcctgacccacctgttcccg
gcgcccgagacgctcatcgagcacgcacccgcgtcactggctatgccgcagacccgcaag
gacaccctcgcggcgctgctacgggccctcgtgagcggcgaactcgacctggacgtcggc
agcgactggcagcacgccagagccctcctcgcggcccttcccggcttcgggccgtggacc
gtggagaccatcgccatgcgcgcgctcggcgacccggacgcgttcctccccaccgacctc
ggggtcaggtacgcggcccgcgacctgggcctgccgaccactcccgccgcgctgacccgt
catgccgccgcctggcagccatggcgcgcatacgcgacgcagtacctgtgggccacgggc
gaccacccgatcaacgcccttccccaggacgaacgaacgaccatgacactccccgccgac
ccatccgccagtcacctcgtcccagccacggaaggcaccgcaccatga
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