Actinacidiphila reveromycinica: RVR_4835
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Entry
RVR_4835 CDS
T10579
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
arev Actinacidiphila reveromycinica
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arev03021
]
RVR_4835
Transcription machinery [BR:
arev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RVR_4835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
Sigma70_ECF
HTH_3
DUF7343
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBA98595
UniProt:
A0A7U3UQM8
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All DBs
Position
4130274..4131122
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AA seq
282 aa
AA seq
DB search
MSVQLGSPKVLRTDATDADAPHDAVHSDAIDTRTLSRSLFLRLAELPVDSPDRTYVRDTL
IELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTIVGEV
KRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVAELAGCLGVSEEDVVDGLA
VGNAYTASSLDSPPPEDDGGEGTLADRLGYEDSALEGVEYRESLKPLLAQLPPRERQIIM
LRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRIGLTSEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacagttgggcagtcccaaggtgcttcgtaccgacgcaaccgacgctgacgca
ccgcatgacgctgtgcacagcgatgccatcgacacccgcacgctgtcccgttcgctcttc
ctgcggctggcggagcttcccgtcgacagcccggaccgcacctacgtccgcgacacgctc
atcgagctgaacctcccgctggtgcggtacgccgccgcccgtttccgcagccgcaacgag
ccgatggaggacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccggttc
gactgcgagcgcggcgtggagttcccgaccttcgcgatgccgaccatcgtcggcgaggtg
aagcgcttcttccgcgacacctcgtggtcggtgcgggtgccgcggcggctccaggagctg
cggctggcgctgaccaaggcgagcgacgagctgtcccagaagctggaccgctctccgacc
gtcgccgaactggccggctgcctcggcgtctccgaggaggacgtggtcgacggcctggcg
gtgggcaacgcctacaccgccagctcgctggactccccgccgcccgaggacgacggcggc
gagggcaccctggccgaccggctgggatacgaggacagcgccctcgaaggcgtggagtac
cgcgagtcgctgaagcccctgctggcccaactgcccccgcgggagcgccagatcatcatg
ctgcggttcttcgcgaacatgacgcagtcgcagatcggcgaggaggtcggcatctcccag
atgcacgtctcccggttgctcacccggaccctggcccagctccgcatcgggctgacctct
gaggcgtga
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