Actinacidiphila reveromycinica: RVR_5587
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Entry
RVR_5587 CDS
T10579
Name
(GenBank) putative transcriptional regulator with cyclic nucleotide-binding domain
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
arev Actinacidiphila reveromycinica
Pathway
arev02020
Two-component system
arev02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RVR_5587
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RVR_5587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arev03000
]
RVR_5587
Transcription factors [BR:
arev03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RVR_5587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
MarR_2
GntR
Xre-like-HTH
Sigma70_r4
HTH_3
HTH_ParB
HTH_24
Sigma70_r4_2
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
BBA99106
UniProt:
A0A7U3UUY5
LinkDB
All DBs
Position
complement(4751183..4751857)
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AA seq
224 aa
AA seq
DB search
MDDVLRRAPLFAALDDEQAAELRASMTEVTLARGDALFHEGDPGDRLYVVTEGKVKLHRT
SPDGRENMLAVVGPGELIGELSLFDPGPRTATGTALTEVKLLGLGHGDLQPWLNVRPEVS
TALLRAVARRLRRTNDVMSDLVFSDVPGRVAKALLDLSRRFGVQSEEGIHVVHDLTQEEL
AQLVGASRETVNKALADFAGRGWLRLEARAVILLDVERLAKRSR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgttctgcgccgtgccccgcttttcgcggcgctcgacgacgagcaggccgct
gaactgcgtgcctccatgaccgaggtcacgctggcgcgtggcgacgcgctgttccacgag
ggcgaccccggggaccggctgtacgtcgtgaccgagggcaaggtgaagctgcaccgcacc
tcgcccgacggccgggagaacatgctggccgtggtgggtcccggcgagctgatcggggag
ctgtcgctcttcgaccccggcccgcgcaccgccaccggcaccgcgctgaccgaggtgaag
ctcctcggcctgggccacggcgacctccagccctggctgaacgtgcgccccgaggtctcc
acggcgctgctgcgcgcggtcgcccgccgcctgcgccgcaccaacgacgtcatgtccgac
ctggtcttctccgacgtgcccggccgcgtggccaaggccctgctggacctgtcccgccgg
ttcggcgtgcagtccgaggagggcatccacgtggtgcacgacctcacgcaggaggagctg
gcgcagctcgtcggcgcctcccgcgagaccgtgaacaaggcgctcgccgacttcgccggg
cggggctggctgcggctggaggcccgcgcggtcatcctcctcgacgtggagcgcctggcg
aagcgcagccggtag
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