Actinacidiphila reveromycinica: RVR_6241
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Entry
RVR_6241 CDS
T10579
Name
(GenBank) putative RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arev Actinacidiphila reveromycinica
Pathway
arev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RVR_6241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arev03021
]
RVR_6241
03400 DNA repair and recombination proteins [BR:
arev03400
]
RVR_6241
Enzymes [BR:
arev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RVR_6241
Transcription machinery [BR:
arev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RVR_6241
DNA repair and recombination proteins [BR:
arev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RVR_6241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AbiEi_4
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBA99567
UniProt:
A0A7U3VQ83
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All DBs
Position
5243597..5244619
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PDLVLATLNAKGKLEMELTVERGRGYVSAVQNKQQGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDVDAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
acgctcctctcctcgatcccgggtgcggctgtcacctcgatccggatcgacggggtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctgaacatc
aagcagctcgtggtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtgtggtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctggtgctggccacgctcaacgccaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgcggtgcagaacaagcagcagggccaggagatcggc
cgtatcccggtcgactccatctacagcccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccgcgtgacgccatggcgtcggccggcaagaccctggtcgagctgttcggc
ctggcccgcgagctgaacgtcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgcggacctggcgctgccgatcgaggagctggagctgaccgtccgctcc
tacaactgcctcaagcgcgagggcatccactcggtgggcgagctggtggcccgctccgag
gcggacctgctcgacatccgcaacttcggcgccaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgtggacgcgggcttcgtggagaccgagcagtac
tga
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