Actinacidiphila reveromycinica: RVR_6244
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Entry
RVR_6244 CDS
T10579
Name
(GenBank) putative pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
arev Actinacidiphila reveromycinica
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arev03016
]
RVR_6244
Enzymes [BR:
arev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RVR_6244
Transfer RNA biogenesis [BR:
arev03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RVR_6244
Prokaryotic type
RVR_6244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBA99569
UniProt:
A0A7U3UVJ3
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All DBs
Position
5245438..5246283
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AA seq
281 aa
AA seq
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MSERPADGFVRVRLDLGYDGADFSGWAKQRSRRTVQGELESAIATVLRLPDPVELTVAGR
TDAGVHARGQVAHVDLPAEVWERESGRLRRRLAGRLPWDVRVWGVAQAPPGFDARFSAVW
RRYAYRIGDHPGGVDPLLRGHVLWHDRPVDVDLMNDAAKLMLGEHDFAAYCKKREGATTI
RTLLDLAWERTADGLAVATVRADAFCHNMVRALVGAMILVGDGHRPVGFPAEVLAGRERH
SAVNVVRPHGLTLEEVGYPADELLAARSREARNIRTLPGCR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagaggccggcggacgggttcgtccgggtgcgcttggatcttgggtacgacggg
gcggacttctccgggtgggcgaagcagcgcagccggcgcaccgtgcagggggagctggag
tccgcgatcgccacggtgctgcggctgccggacccggtcgagctgacggtggcgggccgc
accgacgcgggcgtgcacgcccgcgggcaggtggcgcacgtggacctgccggccgaggtg
tgggagcgggagagcgggaggctgcggcgccggctggccgggcggctgccgtgggacgtg
cgggtgtggggggtggcgcaggcgccgcccggcttcgacgcccggttctccgcggtgtgg
cgccggtacgcgtaccggatcggcgaccacccgggcggggtggacccgctgctgcgcggc
cacgtgctgtggcacgaccgcccggtggacgtggacctgatgaacgacgccgcgaagctg
atgctgggggagcacgacttcgccgcctactgcaagaagcgggagggcgcgaccaccatc
cgcaccctgctcgacctggcgtgggagcggaccgcggacggcctggcggtggcgacggta
cgggccgacgccttctgccacaacatggtgcgggcgctggtcggggcgatgatcctggtc
ggcgacgggcaccggccggtcggcttccccgcggaggtgctggccggacgcgagcggcac
tcggccgtcaacgtggtgcggccgcacggcctgacgctggaggaggtcggctacccggcc
gacgagctgctggccgcgcgcagccgggaggcccgcaacatcaggacgctgcccggctgc
cggtaa
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