Actinacidiphila reveromycinica: RVR_6279
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Entry
RVR_6279 CDS
T10579
Name
(GenBank) putative class I heat-shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
arev Actinacidiphila reveromycinica
Pathway
arev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RVR_6279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arev03019
]
RVR_6279
03110 Chaperones and folding catalysts [BR:
arev03110
]
RVR_6279
03029 Mitochondrial biogenesis [BR:
arev03029
]
RVR_6279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arev04147
]
RVR_6279
Enzymes [BR:
arev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RVR_6279
Messenger RNA biogenesis [BR:
arev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RVR_6279
Chaperones and folding catalysts [BR:
arev03110
]
Heat shock proteins
HSP60 / Chaperonin
RVR_6279
Mitochondrial biogenesis [BR:
arev03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RVR_6279
Exosome [BR:
arev04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RVR_6279
Exosomal proteins of other body fluids (saliva and urine)
RVR_6279
Exosomal proteins of breast cancer cells
RVR_6279
Exosomal proteins of colorectal cancer cells
RVR_6279
Exosomal proteins of bladder cancer cells
RVR_6279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBA99591
UniProt:
A0A7U3UVW0
LinkDB
All DBs
Position
5265490..5267112
Genome browser
AA seq
540 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDDLIATARAIEGKEDIAAVAALSAQDKQVGDLIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILIHQGKIASIQDLLPLLEKVIQ
ANSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGATV
IAEEVGLKLDQAGLDLLGSARRVTVTKDETTIVDGAGDKAEIEGRVGQIKAEISSTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLGDNLGKSGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGHGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPEAAAAGHGHSH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagctcgccgacaccgtgaaggtgaccatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgccccgaccatcaccaacgacggcgtgaccatcgcccgcgaggtggag
atcgaggacccctacgagaacctgggcgcccagctcgtcaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgcgaccgtgctcgcgcaggcgctggtccgc
gagggtctgcgcaacgtcgccgccggcgcctcccccgccgccctgaagaagggcatcgac
gcggccgtcaaggcggtctccgacgacctgatcgccaccgcccgcgcgatcgagggcaag
gaggacatcgccgccgtcgccgcgctgtccgcccaggacaagcaggtcggcgacctgatc
gccgaggcgatggacaaggtcggcaaggacggcgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccc
tacttcgtcaccgaccaggagcggatggaggccgtcctcgacgacccgtacatcctcatc
caccagggcaagatcgcctcgatccaggacctgctgccgctgctggagaaggtcatccag
gccaactcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcc
accctcgtggtcaacaagatccgcggcaccttcaacgcggtcgcggtcaaggccccgggc
ttcggtgaccgccgcaaggccatgctgggcgacatcgccacgctgaccggcgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacctgctgggcagcgcc
cgccgggtcaccgtcaccaaggacgagaccaccatcgtcgacggcgccggcgacaaggcc
gagatcgagggccgggtcggccagatcaaggccgagatctcctcgaccgactccgactgg
gaccgcgagaagctccaggagcgcctggcgaagctggccggcggcgtctgcgtgatcaag
gtcggcgcggccaccgaggtcgagctgaaggagaagaagcaccgcctggaggacgcgatc
tccgcgacccgcgcggccgtcgaggagggcatcgtctccggcggtggctccgcgctcgtg
cacgcggtcaaggtgctcggcgacaacctcggcaagtccggcgacgaggcgaccggtgtc
gccgtcgtgcgccgcgccgcggtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctcgacaagggccacggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtcacc
cgctccgccctggagaacgcggcgtcgatcgcgtccctgctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggagccggaggccgctgccgccggtcacggccacagccac
tga
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integrated database retrieval system
