Actinacidiphila reveromycinica: RVR_7171
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Entry
RVR_7171 CDS
T10579
Name
(GenBank) putative transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
arev Actinacidiphila reveromycinica
Pathway
arev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RVR_7171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arev03021
]
RVR_7171
03019 Messenger RNA biogenesis [BR:
arev03019
]
RVR_7171
Transcription machinery [BR:
arev03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RVR_7171
Messenger RNA biogenesis [BR:
arev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RVR_7171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
NACHT
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBB00208
UniProt:
A0A7U3UWQ9
LinkDB
All DBs
Position
6000949..6002982
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AA seq
677 aa
AA seq
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MSDTTDLMGVRADNTVAASEAAAPASGAATAARRRRSGTGLEGMVLAELQQVAAGLGIKG
TARMRKGQLIETIKERQAGGGAAAEKAAAPAAGAPAEKPKRRATSRARLEQAAEAAEAPA
AAAPAAKEPEAKQQQIEIPGQPAGEKAKAAATAERAQGERAAQQAERGADKADKAAEAAA
DSAEGREAKGGDAKHQGGDDRQDRQRGQRDRRERQRDRQRNRGEDGGDGQQGGGQGRRER
QQGGQQHQGGGQHQQQAQQQDDDEFGEGRGRRRGRYRDRRGRGRGRDEFGGGEPQVADDD
VLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKDGER
REKFNALVRLDSANGMGADSGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIG
KGQRGLIVAPPKTGKTMIMQAIANAITTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIS
STFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGV
DSTALYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNMELKLDRKL
ADKRIFPAVDVDPSGTRKEEILLDREELAIVWKLRRVLHALDSQQAIELLLDKMKQTKSN
AEFLMQIAKTTPGQNND
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtgcgcgcagacaacactgtcgccgcgtccgaa
gccgccgcgcctgcctccggtgctgccacggccgcccggcgccgtcggtccgggaccggc
ctggagggcatggtcctggccgaactccagcaggtggccgcaggtctcggcatcaagggc
accgcgcggatgcgcaagggccagctcatcgagacgatcaaggagcgccaggccggcggt
ggcgccgcggccgagaaggccgccgcccccgcggccggtgcgccggccgagaagcccaag
cgccgcgccacctcgcgggcacggctggagcaggcggccgaggccgccgaggccccggcg
gccgccgcaccggccgcgaaggagccggaggccaagcagcagcagatcgagatccccggc
cagccggccggcgagaaggcgaaggccgccgcgacggccgagcgggcgcagggcgagcgc
gcggcgcagcaggccgagcgcggcgccgacaaggcggacaaggccgccgaggccgccgcc
gacagcgccgagggacgcgaggccaagggcggcgacgccaagcaccagggcggcgacgac
cgccaggaccgccagcgcggccagcgggaccgccgcgagcggcagcgcgaccgccagcgc
aaccgcggcgaggacggcggcgacgggcagcagggcggcggccagggccggcgggagcgc
cagcagggcggccagcagcaccagggcggcggccagcaccagcagcaggcccagcagcag
gacgacgacgagttcggcgagggccgcggccggcgccggggccgctaccgcgaccggcgc
gggcgcggccggggccgggacgagttcggcggcggcgagccgcaggtcgccgacgacgac
gtgctgatccccgtcgcgggcatcctcgacatcctcgacaactacgcgttcatccgcacc
tcgggctacctgccggggccgaacgacgtgtacgtctcgctcgcccaggtccgcaagaac
ggcctgcgcaagggcgaccacgtcaccggcgcggtgcgccagcccaaggacggcgagcgg
cgcgagaagttcaacgcgctggtccgcctcgactcggcgaacggcatgggcgccgactcc
ggccgcggccgtccggagttcaacaagctcaccccgctctacccgcaggaccggctccgg
ctggagaccgacccgggtgtgctgaccacgcggatcatcgacctggtctcgccgatcggc
aagggccagcgcggcctgatcgtcgccccgccgaagaccggcaagacgatgatcatgcag
gcgatcgccaacgcgatcaccaccaacaaccccgagtgccacctcatggtcgtcctcgtc
gacgagcggcccgaagaggtcaccgacatgcagcgctcggtgaagggcgaggtcatctcc
tcgaccttcgaccggcccgccgaggaccacaccaccgtcgccgagctcgccatcgagcgg
gccaagcggctggtggagctgggccacgacgtggtggtgctgctcgactcgatcacccgc
ctgggccgcgcctacaacctggccgcgcccgcctccggccgcatcctgtccggcggtgtc
gactccacggcgctctacccgccgaagcgcttcttcggcgcggcgcgcaacatcgaggac
ggcggctcgctgaccatcctggccaccgcgctggtcgagaccggctcgcggatggacgag
gtgatcttcgaggagttcaagggcaccggcaacatggagctcaagctcgaccgcaagctc
gccgacaagcgcatcttccccgcggtggacgtcgacccgtccggcacccgcaaggaggag
atcctgctggaccgcgaggagttggcgatcgtctggaagctgcgccgggtgctgcacgcg
ctcgactcgcagcaggcgatcgagctgctgctggacaagatgaagcagaccaagtccaac
gccgagttcctgatgcagatcgccaagaccacgcctggccagaacaacgactga
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