Actinacidiphila reveromycinica: RVR_7561
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Entry
RVR_7561 CDS
T10579
Name
(GenBank) putative RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
arev Actinacidiphila reveromycinica
Pathway
arev02020
Two-component system
arev02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RVR_7561
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RVR_7561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arev03021
]
RVR_7561
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
arev02035
]
RVR_7561
Transcription machinery [BR:
arev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RVR_7561
Bacterial motility proteins [BR:
arev02035
]
Flagellar system
Flagellar assembly proteins
Stator
RVR_7561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
CENP-B_N
HTH_31
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BBB00480
UniProt:
A0A7U3VR73
LinkDB
All DBs
Position
6303784..6304620
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AA seq
278 aa
AA seq
DB search
MPQHTPGSEPAAVATARAIPRPAAPTSLDALWRTYKSTGDARLREQLILHYSPLVKYVAG
RVSVGLPANVEQADFVSSGVFGLIDAIEKFDPDRAIKFETYAITRIRGAMIDELRALDWI
PRSVRQKARAVERAYATLEAKLHRTPSEPEVAAEMGVGLEELHGVFSALSLANVVALEEL
LHVGAESGDRLSLVDTLEDTGADNPSDVAEDRELRRLLARAVNTLPEREKTVVTLYYYEG
LTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADMGAR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacccccgggtccgaaccggcggcggtggccaccgcccgggccatcccc
cggcccgccgcacccacctcgctcgacgcgctgtggcggacctacaagtccacgggggac
gcgcggctgcgggagcagctcatcctgcactactcgccgctggtcaagtacgtggccggc
cgggtcagcgtcggactgcccgcgaacgtggagcaggccgacttcgtctcctccggcgtg
ttcggcctgatcgacgcgatcgagaagttcgacccggaccgcgccatcaagttcgagacc
tacgccatcacccgcatccgcggcgccatgatcgacgagctgcgcgcgctggactggatc
ccccgatcggtccggcagaaggcccgcgcggtcgagcgggcctacgccacgctggaggcg
aagctgcaccgcacccccagcgagcccgaggtcgccgccgagatgggcgtgggcctggag
gagctgcacggcgtgttcagcgcgctctcactcgccaacgtggtcgccctggaggagctg
ctgcacgtcggcgccgagagcggcgaccggctcagcctggtcgacaccctggaggacacc
ggcgcggacaacccgtccgacgtcgccgaggaccgcgagctgcgcaggctgctcgcccgc
gccgtcaacaccctgcccgagcgggagaagaccgtggtcaccctgtactactacgagggg
ctcacactcgccgagatcggccaggtactgggcgtcaccgagagccgcgtcagccagatc
cacaccaagtccgtgctccaactccgggcgaagctggcggacatgggggcacgctga
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