Actinacidiphila reveromycinica: RVR_7675
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Entry
RVR_7675 CDS
T10579
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
arev Actinacidiphila reveromycinica
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arev03009
]
RVR_7675
Enzymes [BR:
arev01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RVR_7675
Ribosome biogenesis [BR:
arev03009
]
Prokaryotic type
ribosomal protein modification factors
RVR_7675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBB00551
UniProt:
A0A7U3VR80
LinkDB
All DBs
Position
6407002..6408708
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AA seq
568 aa
AA seq
DB search
MPEPRTVALVTLGCARNEVDSEELAGRLAADGWRLVEDASDADVAVVNTCGFVDAAKKDS
VDALLEANDLKAQGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLRTIL
SGGIHASHTPRDRRKLLPVSPAERQGAVSGTAGGGARAGVALPGHGQGAAVAPGESAAGR
GSAGAQATAGATAGAEAVSGAVAEPDPAWQVPDLPEGVAPASGPRAPLRRRLDSGPVASV
KLASGCDRRCTFCAIPSFRGSFISRRPSDVLGETRWLAGQGVKEVMLVSENNTSYGKDLG
DIRLLETLLPELAAVDGVERVRISYLQPAEMRPGLIDVMTGTPGVVPYFDLSFQHSAPGV
LRAMRRFGDTERFLELLHTIRSKAPEAGVRSNFIVGFPGESEEDLAELERFLGAARLDAI
GVFGYSDEEGTEAATFEDKLDEDVVAARLARVSRLAEELTAQRAEERLGATVRVLVESFD
EETGETTGRADHQAPETDGQVVLLPPGGNAPGAAAVGDSGGAWRPAPGTFVTAKVTGTEG
VDLIAEVLPELAGAPGGQGAECSEGVGR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaccccgtaccgtcgctcttgtcacgctcggatgcgcccgcaatgaggtggac
tcggaagagctcgccggccggctggcggcggacggctggcggctcgtcgaggacgcctcc
gacgccgatgtggccgtggtgaacacgtgcggcttcgtcgacgccgccaagaaggactcg
gtcgacgccctgctggaggcgaacgacctcaaggcccagggccgcacccaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggacctggccgaggcgctgccggaggcc
gacggcgtcctcggcttcgacgactacgccgacatctccgaccggctgcgcaccatcctg
tccggcggcatccacgcctcgcacaccccgcgtgaccggcgcaagctgctcccggtgagc
ccggcggagcggcagggcgcggtgtccgggacggccggcgggggcgcgcgggcgggggtg
gcgctgcccgggcacgggcagggcgcggccgtcgcgccgggtgagtccgcggccggcaga
ggcagcgccggcgcgcaggcgaccgccggcgcgaccgccggcgcggaagccgtttcgggg
gccgttgcggagccggacccggcctggcaggtacccgacctgccggagggcgtcgcgccc
gcgtcggggccgcgcgcgccgctgcgccggcggctggactcgggcccggtcgcgtcggtg
aagctcgcctccggctgcgaccgccgctgcaccttctgcgcgatcccgtccttccgcggc
tcgttcatctcccggcgcccgtccgacgtgctcggggagacccgctggctggccgggcag
ggcgtcaaggaggtcatgctcgtcagcgagaacaacacctcctacggcaaggacctgggc
gacatccgcctgctggagacgctgctgccggagctggccgccgtcgacggcgtggagcgg
gtgcggatcagctacctccaacccgccgagatgcggcccgggctcatcgacgtgatgacc
ggcaccccgggcgtggtgccgtacttcgacctgtccttccagcactccgcgccgggtgtg
ctgcgcgccatgcgccgcttcggcgacaccgagcggttcctcgaactgctgcacacgatc
cggtcgaaggcgcccgaggccggcgtccgctccaacttcatcgtcggcttcccgggcgag
agcgaggaggacctcgcggagctggagcgcttcctcggtgcggcccgcctcgacgccatc
ggcgtgttcggctactccgacgaggagggcacggaggccgccaccttcgaggacaagctc
gacgaggacgtggtcgccgcccgcctcgcgcgggtctcccggctggccgaggagctgacc
gcgcagcgcgcggaggagcggctcggcgcgacggtccgggtgctggtcgagtccttcgac
gaggagaccggcgagaccaccgggcgcgccgaccaccaggcgcctgagaccgacggccag
gtcgtcctgctgccccccggcgggaacgcccccggcgcggcggccgttggggattccggc
ggggcgtggcggcccgcgcccgggacgttcgtgaccgcgaaggtgacgggcaccgagggc
gtggacctgatcgccgaagtgctgcccgaactggcgggcgcgcccggaggccagggcgcg
gagtgttccgagggagtgggcagatga
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