Anaerostipes rhamnosivorans: AR1Y2_0249
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Entry
AR1Y2_0249 CDS
T05962
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arf
Anaerostipes rhamnosivorans
Pathway
arf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR1Y2_0249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arf03019
]
AR1Y2_0249
03400 DNA repair and recombination proteins [BR:
arf03400
]
AR1Y2_0249
Enzymes [BR:
arf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AR1Y2_0249
Messenger RNA biogenesis [BR:
arf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR1Y2_0249
DNA repair and recombination proteins [BR:
arf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AR1Y2_0249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCP33703
UniProt:
A0A4P8ID86
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All DBs
Position
266936..268795
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AA seq
619 aa
AA seq
DB search
MQSAHGLLKQYFGYDDFREGQKPLINAVLEGQDVLGIMPTGAGKSLCFQIPALLMQGITL
VVSPLISLMKDQVAALNQAGIHAAFLNSSLSMGQYRKALSLAREGRYKIIYVAPERLETE
GFLQFALSPEVEISFLAIDEAHCVSQWGQDFRPSYLKILSFLEKLPSRPVLGAYTATATA
EVREDILDILKLRSPLVLTTGFDRSNLFFGVKKPRDKYRELETYIKEKEEKMPGSSGIVY
CLSRKNVEEVCYRLREAGFSVTRYHAGLADAERRENQDDFIYDRKQIMVATNAFGMGIDK
PDVRFVIHYNMPKNMESYYQEAGRAGRDGEAAECILYFGASDQRTNRFLIESGEENEELD
REARRIILQRDLERLQQITFYCATSECLRHYILDYFGEESGTECGNCSNCLEEFEFADMT
EQAEKVVRCIQDCQRSFGINLIVDVLRGADNQKIRQRDLNENPEYKSLSDMTVPRLKQLL
NEMIMQGFLALSNDDYPVLELTDRSDELLEGARLTIKVSKKEEKQPPKFRKKKAGAVSAL
AKEDVELFEELRSLRMEIAKEEKVPPYMVFSDKTLAGMSSERPQTLNEMLEVSGVGQFKL
EKYGERFLEGIKLFAEKEE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcacacggcttattaaaacaatattttggatatgatgattttagagaaggg
cagaagcctttgattaacgcagttctggaaggtcaggatgtattgggcattatgcccact
ggagcagggaagtctctttgttttcagattccggcgttgttgatgcaggggattacactg
gtggtctctccgctgatctctcttatgaaggatcaggtggcagcgttaaatcaggccgga
attcatgcagcctttttgaacagttcgctgagtatgggtcagtacaggaaggctctcagc
ctggccagggagggccgatataagatcatttatgtggcgccggagaggcttgagacagaa
gggtttctgcagtttgccctttccccggaagtggagatttcctttttggccattgatgaa
gcccattgtgtttcccagtggggccaggatttccggcccagctatttaaagatcctttct
tttttagagaaactgccgtcccggccagtgttgggcgcatatactgccacggctacggcg
gaggtaagggaagacatcctggatattttaaagcttagaagtcccttggttttgaccaca
ggatttgaccggagcaatctgttcttcggagtgaaaaagcccagggataagtatcgggag
ttggaaacctatataaaagaaaaagaggagaagatgccgggcagcagcggtattgtttac
tgtctttccaggaaaaatgtagaggaagtctgttaccggctcagagaagctggtttttct
gtgacgagatatcacgcagggctggcagatgcagagcggcgggaaaaccaggatgatttt
atctatgacaggaaacagatcatggtagcaaccaatgcgttcggaatgggaattgataag
ccggatgtgaggtttgtgattcactataatatgccgaagaatatggagagctattatcag
gaggccggaagggcaggcagagatggggaagcggcagaatgtattctttattttggggct
tcggaccagaggaccaaccgttttttgatcgaaagcggagaagaaaatgaagaactggac
cgggaggccaggagaatcatactgcagagggacttggagcgacttcaacagatcacattc
tactgtgccactagtgaatgtctgcggcattatattttagattattttggggaagaaagc
ggcacggagtgcggaaactgcagcaactgtctggaagaatttgaatttgcagatatgacg
gagcaggcagagaaggtggtccgatgcattcaggactgccaaagaagctttggtatcaac
ctgatcgtggatgttctgagaggggcagataaccaaaagattcgccaaagggatctgaat
gaaaatccagaatataagtctttatctgatatgacagtgccgagactgaagcagctgttg
aacgagatgattatgcagggatttttggctttgagtaatgatgattacccggtgttggaa
ctgactgatagatcggatgaacttcttgaaggagccagattaacgataaaggtttccaag
aaggaggagaaacagccgccgaaattcagaaagaagaaggccggtgccgtttctgcgctg
gcaaaggaggatgtggaattgtttgaagaactgcgcagtctcaggatggagatcgcaaaa
gaggaaaaagttccgccttatatggtattctcggataaaacactggcaggcatgagttcg
gagaggccgcagaccttgaatgaaatgctggaggtaagcggagtaggacagtttaagctt
gagaaatacggagagcggtttctggagggaattaaactgtttgctgaaaaagaagagtaa
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